LOCUS AMU93067.1 906 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-73 PROTEIN_ID AMU93067.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_00385" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_017462343.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTQSSSSRRR RRLWKFAGAE FDEASWTLRV DGHAVTLEGK PLEVLHELLL RAGEVVTKDE 61 IFDAVWPGVT VVEGSLTTAI SKLRKALGET REQIVETVPR VGYKLAAPVA IESVESPLAP 121 RFAFAAGDAV PGRRQWRLVE ALGDSGADDV WLARHDKTGE TRVFKFADAP DRLRSLKREA 181 ALTRLLFAGL GKSAPLPALL EWNFDASPFF LEYSYGGRDL TAWASERGGL AEIAVETRIA 241 VAAMIARAVA RMHDLGVLHK DLKPANILIA TEDGGETIRL ADFGSGRLLD DSVLASFQIT 301 DPGSLDPDLA RDEPRSGTLA YRAPELTGDA MPTAKSDIYA LGMILYQLVV GDFSASLAPG 361 WEGRIADPVL RSDILAAAEG DPALRLASAA DLADRLETID RRRADASAAA RRAAAAEEAR 421 RFEEKQAARR PWIRAAIASL AGGFIASSAL AAYAWHQRGA ALEARDQAET SYAFIAEDVL 481 SSPDPAKSST DETVIEAMKR ASANIDARYA RSPGTAARLH LAVARAFYQR SDFDTARTEY 541 ARAATLFGKA GEADSEDAVL GRLGSIHMDA TSGQPGRLEA AGAAIAKEQK ALGDRAKSGR 601 IGFALAQSEG AYAYTADIER AERAIRRAVA IGSAPGARVS PTQLLKARSS LALVMLREGK 661 VKEAEPVARA IVADSTRIRG ADNPDTLVTR QHWVTALSML GEHERALRES GPLIAALERR 721 FGPDHRFTLA MHSTRFESLA ALGRYGEAAV EAKRVWEGAA TQAGALSHQA LVGQNDYASA 781 LCQTNRRRDA LPILADAAAK ARQAFGADYG LTHAIQFYLG ECELANHRFI QAQRSFSLVD 841 ATKVAELTGR PDFAATLAAA RAETMLGLGD RAKAGTLLDT AEAAAKASED PELKQRLQRL 901 RAQLRG //