LOCUS AGL87622.1 441 aa PRT BCT 30-JAN-2014
DEFINITION Pseudomonas protegens CHA0 porin D protein.
ACCESSION CP003190-5815
PROTEIN_ID AGL87622.1
SOURCE Pseudomonas protegens CHA0
ORGANISM Pseudomonas protegens CHA0
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Genome Sequence of Pseudomonas protegens CHA0
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2011) Genomic and Applied Microbiology,
Goettingen Genomics Laboratory, Georg-August-University Goettingen,
Grisebachstrasse 8, Goettingen, Lower Saxony 37077, Germany
COMMENT Source DNA of Pseudominas protegens CHA0 is available at the
Institute of Integrative Biology (IBZ), Plant Pathology, Swiss
Federal Institute of Technology Zuerich, Universitaetsstrasse 2,
CH-8092 Zuerich (monika.maurhofer@usys.ethz.ch).
##Genome-Assembly-Data-START##
Assembly Method :: MIRA assembler v. 3.4.0.1
Genome Coverage :: 5X (454); 100X (Illumina)
Sequencing Technology :: 454 GS FLX+; Illumina Hiseq; Sanger
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas protegens CHA0"
/mol_type="genomic DNA"
/strain="CHA0"
/type_material="type strain of Pseudomonas protegens"
/db_xref="taxon:1124983"
protein /gene="oprD15"
/locus_tag="PFLCHA0_c58940"
/EC_number="3.4.21.-"
/transl_table=11
BEGIN
1 MNKSTLALAV AVGVLAQQAG AAGFIEDSKA TLGLRNFYIN TDNRDGPGAN KNEEWGQGFD
61 LRFISGYTQG TVQFGVDAIG LYGVRLDSSP AKSGNSSGSA SGGTIFPSDG NRAVPDFASL
121 GLTGKVKISQ TELKIGTLQP NNPVIKTNDG RLLPQTFQGG QITSNEIKDL TLTAGQIEHA
181 KGRNSTNNEG LSIANANAGS NYSKGEFTNK FYFAGADYKI TKDLTASYYY GELKDFYTQN
241 FLGLVHNWAI GPGVLKSDLR YYRSRDNGAN GDTATYFSPG YYGGNITKGK VDNNLYSYLA
301 LYSVEGHTFG GGYQYTNGDS DFPWLNQGDG SSNSTITDMQ IQKFARAGER TWQARYGYDF
361 AKVGVPGLTA NVIYLRGNNI ETTVGDKTEW ERDLTVAYVI PEGPLKNLGF AWKNAMWRTD
421 LASTRSQDEN RLIVSYSIPL L
//