LOCUS AGL86718.1 451 aa PRT BCT 30-JAN-2014
DEFINITION Pseudomonas protegens CHA0 porin D protein.
ACCESSION CP003190-4911
PROTEIN_ID AGL86718.1
SOURCE Pseudomonas protegens CHA0
ORGANISM Pseudomonas protegens CHA0
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Genome Sequence of Pseudomonas protegens CHA0
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2011) Genomic and Applied Microbiology,
Goettingen Genomics Laboratory, Georg-August-University Goettingen,
Grisebachstrasse 8, Goettingen, Lower Saxony 37077, Germany
COMMENT Source DNA of Pseudominas protegens CHA0 is available at the
Institute of Integrative Biology (IBZ), Plant Pathology, Swiss
Federal Institute of Technology Zuerich, Universitaetsstrasse 2,
CH-8092 Zuerich (monika.maurhofer@usys.ethz.ch).
##Genome-Assembly-Data-START##
Assembly Method :: MIRA assembler v. 3.4.0.1
Genome Coverage :: 5X (454); 100X (Illumina)
Sequencing Technology :: 454 GS FLX+; Illumina Hiseq; Sanger
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas protegens CHA0"
/mol_type="genomic DNA"
/strain="CHA0"
/type_material="type strain of Pseudomonas protegens"
/db_xref="taxon:1124983"
protein /gene="oprD12"
/locus_tag="PFLCHA0_c49690"
/EC_number="3.4.21.-"
/transl_table=11
BEGIN
1 MSVYRTSIVL LGLWLGPGGI SQAGDEDWEE LFTEGEARMF FDNQYFARDY RNGPNNSGRN
61 RYKPRSERNG YRQEWGQSVQ LYYRSGFTPG LLGLGFDAFA MQAFKLDSGG GRTGTGTLAL
121 DGKGHPRDSH GKVGGALKLK VAEAQLRYGN FTTQAPVLAA NNSRIIPGMA YGWQLQRDWD
181 GLSLEAARLS ALSGPTESKA RGGISTVYGR LSGARINIDS AQYLGLNYRG EQWRGAYYLG
241 QLEDVWTQHY LNLGHTLELA DERSLSNTFN LYRTRDSGAS LFGPIDNLIA SHALAYRFDA
301 HRLTLAYQRS FSDTPFDYIG FGDGQTGQSI VLANSAPYSD FNGPRERSWQ LRYDQRLAWL
361 GLPDLNLGLR YQRGWGVDGS HAPANSIYRG LYGEDGRHHE TDLDLSYTFS SGSLKGLHLR
421 ATQIWHRGNS AQADGSIDQL RIRVQYPLAL F
//