LOCUS AGL86503.1 446 aa PRT BCT 30-JAN-2014
DEFINITION Pseudomonas protegens CHA0 porin D protein.
ACCESSION CP003190-4696
PROTEIN_ID AGL86503.1
SOURCE Pseudomonas protegens CHA0
ORGANISM Pseudomonas protegens CHA0
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Genome Sequence of Pseudomonas protegens CHA0
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2011) Genomic and Applied Microbiology,
Goettingen Genomics Laboratory, Georg-August-University Goettingen,
Grisebachstrasse 8, Goettingen, Lower Saxony 37077, Germany
COMMENT Source DNA of Pseudominas protegens CHA0 is available at the
Institute of Integrative Biology (IBZ), Plant Pathology, Swiss
Federal Institute of Technology Zuerich, Universitaetsstrasse 2,
CH-8092 Zuerich (monika.maurhofer@usys.ethz.ch).
##Genome-Assembly-Data-START##
Assembly Method :: MIRA assembler v. 3.4.0.1
Genome Coverage :: 5X (454); 100X (Illumina)
Sequencing Technology :: 454 GS FLX+; Illumina Hiseq; Sanger
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas protegens CHA0"
/mol_type="genomic DNA"
/strain="CHA0"
/type_material="type strain of Pseudomonas protegens"
/db_xref="taxon:1124983"
protein /gene="oprD11"
/locus_tag="PFLCHA0_c47530"
/EC_number="3.4.21.-"
/transl_table=11
BEGIN
1 MRVMKWSMIA LAVSAGTSQF AIASSQDDAK GFIEDSTLTA KTRAMYMNRD YKDGVGNVRR
61 GNGTYTTGTD DKTSGYRQDT GISELLTYQS GFTQGTVGFG VDAMAMGSVK LDGGSGRAGN
121 GLFATNGSGE PENTQSKLGG AAKFRISDTV LKYGNQFVSS PVFTTDDGRL LPEVATGTLI
181 TSNEIKGLEL IGGRFTALSA QTGMGRDSIN GRSRVTGKQN PGLSSANIVG ATYSGLENFI
241 FAVHASDVED YWKKQYFNVN YTLPLSEKQS LNFDFNGYRS KDDGKKLAGD LDNRVWSLAA
301 AYSIEAHKFT VAYQQSSGKT GYNYGVDGGG TVYVANSVQI SDFVGEDERS WQARYDLNMA
361 SFGVPGLSFM TRYIRGSNVT VADSSDGKEH EWDVEAKYVL QEGPAKDLSF RLRNAIYRGT
421 NSDYRATNYD NLNDLRLIVE YPLSIL
//