LOCUS AGL85847.1 530 aa PRT BCT 30-JAN-2014
DEFINITION Pseudomonas protegens CHA0 putative D,D-dipeptide-binding
periplasmic protein DdpA protein.
ACCESSION CP003190-4040
PROTEIN_ID AGL85847.1
SOURCE Pseudomonas protegens CHA0
ORGANISM Pseudomonas protegens CHA0
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Genome Sequence of Pseudomonas protegens CHA0
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2011) Genomic and Applied Microbiology,
Goettingen Genomics Laboratory, Georg-August-University Goettingen,
Grisebachstrasse 8, Goettingen, Lower Saxony 37077, Germany
COMMENT Source DNA of Pseudominas protegens CHA0 is available at the
Institute of Integrative Biology (IBZ), Plant Pathology, Swiss
Federal Institute of Technology Zuerich, Universitaetsstrasse 2,
CH-8092 Zuerich (monika.maurhofer@usys.ethz.ch).
##Genome-Assembly-Data-START##
Assembly Method :: MIRA assembler v. 3.4.0.1
Genome Coverage :: 5X (454); 100X (Illumina)
Sequencing Technology :: 454 GS FLX+; Illumina Hiseq; Sanger
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas protegens CHA0"
/mol_type="genomic DNA"
/strain="CHA0"
/type_material="type strain of Pseudomonas protegens"
/db_xref="taxon:1124983"
protein /gene="ddpA"
/locus_tag="PFLCHA0_c40830"
/transl_table=11
BEGIN
1 MIKETGMTPN RNHPDVRLST RVALSLLCAA LSLGTWQAAS AAAPKDTLMI GKAADPQTLD
61 PAVTIDNNDW AVTYPAYQKL VTYKVENGKG STEVQGDLAE SWSTSADNLT WDFKLKPGNK
121 FDDGKPVDAA AVKFSFDRLM QLKQGPSGAF PDDMSVAVVD PLTVRFTLKK PYAPFLYTLA
181 HNGGGIINPD VANKGEDVNA YLSTHTAGSG AFRLSNWQKG QALTLEPNSY YAGPKPSLNK
241 VVIKIISEAS VRRLQLERGD LDIIEDMPED QLGTLAGKPG IVIQTFPSLR VNYLYLNNKR
301 APLDNVEARQ ALVQAIDYKG IVDGILKGQA KLMNGPIPDG MWAHDPSLPL MQQNLDGAKA
361 SLAKVPQKIS NLTYLYSDKD ANWESIGLTL QAGLAPLGIN LKMEKLANAT MRERVGKGDY
421 DVAIGSWSPD FADPYMFMNF WFDSSLQGLP GNRSFYSNPE VDSLIREAAA TNDTAKRIEL
481 YQKAQKIVLK DNVYAYLYQK NYSLPMRDSV KGYVFHPMLE QVFNIAEISK
//