LOCUS AGL84335.1 426 aa PRT BCT 30-JAN-2014
DEFINITION Pseudomonas protegens CHA0 porin D protein.
ACCESSION CP003190-2528
PROTEIN_ID AGL84335.1
SOURCE Pseudomonas protegens CHA0
ORGANISM Pseudomonas protegens CHA0
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Genome Sequence of Pseudomonas protegens CHA0
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2011) Genomic and Applied Microbiology,
Goettingen Genomics Laboratory, Georg-August-University Goettingen,
Grisebachstrasse 8, Goettingen, Lower Saxony 37077, Germany
COMMENT Source DNA of Pseudominas protegens CHA0 is available at the
Institute of Integrative Biology (IBZ), Plant Pathology, Swiss
Federal Institute of Technology Zuerich, Universitaetsstrasse 2,
CH-8092 Zuerich (monika.maurhofer@usys.ethz.ch).
##Genome-Assembly-Data-START##
Assembly Method :: MIRA assembler v. 3.4.0.1
Genome Coverage :: 5X (454); 100X (Illumina)
Sequencing Technology :: 454 GS FLX+; Illumina Hiseq; Sanger
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas protegens CHA0"
/mol_type="genomic DNA"
/strain="CHA0"
/type_material="type strain of Pseudomonas protegens"
/db_xref="taxon:1124983"
protein /gene="oprD6"
/locus_tag="PFLCHA0_c25640"
/EC_number="3.4.21.-"
/transl_table=11
BEGIN
1 MNNNNENYLM SHWQSRTLIL SSLSLLPLAA VQGAGFIDDS SLKLQLRNVY FNENFRDEHG
61 LSAKAARSAK SERTEWAQGF LLDYQSGFTP GTLGVGVDAL GLLGVRLDSG KGRSGTGLLP
121 VHDDGRAAGE FASAGATAKV RLAKTTLKYG TLLPKTPVLV YNDARLLPQT YQGTQLTSTD
181 IDGLSLTGGY LQRFKLRDST DSVGLVPDGY SGGQSGDFRY GGAEYKWSKS LRLSYFHGEL
241 ENFYRQDFVG LQHDLALGRG TLTSDLRYFR SADSGAAFDG KIDNRMLSGQ LTYAIAGHSL
301 GGGYQRLSGD AGLPYISGAT VYSFSNAGIG KFIEEGEKTW MLGYGYNFAG LGLPGLTFSS
361 RYLSGNGGKS RTRVDEWERD SELAYVLQQG SFKGLGVKLR NYVYRSDYAR GRDSNRLYIT
421 YDIALW
//