LOCUS AGL83606.1 1072 aa PRT BCT 30-JAN-2014
DEFINITION Pseudomonas protegens CHA0 ribonuclease E protein.
ACCESSION CP003190-1799
PROTEIN_ID AGL83606.1
SOURCE Pseudomonas protegens CHA0
ORGANISM Pseudomonas protegens CHA0
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Genome Sequence of Pseudomonas protegens CHA0
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2011) Genomic and Applied Microbiology,
Goettingen Genomics Laboratory, Georg-August-University Goettingen,
Grisebachstrasse 8, Goettingen, Lower Saxony 37077, Germany
COMMENT Source DNA of Pseudominas protegens CHA0 is available at the
Institute of Integrative Biology (IBZ), Plant Pathology, Swiss
Federal Institute of Technology Zuerich, Universitaetsstrasse 2,
CH-8092 Zuerich (monika.maurhofer@usys.ethz.ch).
##Genome-Assembly-Data-START##
Assembly Method :: MIRA assembler v. 3.4.0.1
Genome Coverage :: 5X (454); 100X (Illumina)
Sequencing Technology :: 454 GS FLX+; Illumina Hiseq; Sanger
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas protegens CHA0"
/mol_type="genomic DNA"
/strain="CHA0"
/type_material="type strain of Pseudomonas protegens"
/db_xref="taxon:1124983"
protein /gene="rne"
/locus_tag="PFLCHA0_c18240"
/EC_number="3.1.26.12"
/transl_table=11
BEGIN
1 MKRMLINATQ PEELRVALVD GQRLYDLDIE SGAREQKKAN IYKGRITRIE PSLEAAFVDF
61 GSERHGFLPL KEISREYFKK APEGRVNIKD VLSEGQEVIV QVEKEERGNK GAALTTFISL
121 AGRYLVLMPN NPRAGGISRR IEGEERNELR EALNGLVAPA DMGLIVRTAG LGRSSEEMQW
181 DLDYLLQLWT AIKEASLDRS APFLIYQESN VIIRAIRDYL RQDIGEVLID SVEAQDEALT
241 FIRQVMPQYA SKIKLYEDSV PLFNRFQIES QIETAFQRVV ELPSGGSIVI DPTEALVSID
301 INSARATKGS DIEETALQTN LEAAEEIARQ LRLRDIGGLI VIDFIDMTPA KNQRAVEEKV
361 RECLEADRAR VQIGRISRFG LLEMSRQRLR PSLGESSGIV CPRCNGTGII RDVESLSLAI
421 LRLIEEEALK DRTAEVRAQV PIPVAAFLLN EKRNSITKIE LRTRARIVIL PNDHLETPHF
481 EVQRLRDDSP EANTNQSSYE IAAAAAEAEE VQPTAATRTL VRQEAAVKTA PARANAPVPT
541 EVVAAPVAAP APVAEPSLFK GLVKSLVSLF ATKEEPAAPV VVEKPVTERP ARSNEEQRRN
601 GRQQSRNRNG RRDEERKPRE ERAPREERAP REERQPREVR EAREEVQAVA REERAPRAPR
661 EERQPRAPRE ERKPRGEREE RVRELREPLD AAPAAAAATA AVVAEERPAR QPREERQPRA
721 PREERQPRAE QAQAAAASEE EALPNEEQLQ EDGQDNAEGE RPRRRSRGQR RRSNRRERQR
781 DANGNVIEGS EENAEEPSSA DLAAGLAVTA AVASTAISAN AEAEAHQQAE RATAAVEDKA
841 PEAPVVEATT PVEAPVVPAV EVAPVAEEQA QVEVAAEPAV VVEAQPVVAE QPAAEPVAQA
901 PVVEEKAIEP VQEAPAPAPV AEPAVVVEEP VAAQQPAQVE EPAPVAAPVV AEEPAPAVEA
961 EAAPVSTLTS NGRAPNDPRE VRRRKREAER LQKEAELAAA AAPAEAVVTA EPAPVEAPEV
1021 VEAPPAPAEE TAPAPVAEPA VEEAAPVAEQ APRAVEHAVH AEEEQHEPKP LV
//