LOCUS AGL83155.1 406 aa PRT BCT 30-JAN-2014
DEFINITION Pseudomonas protegens CHA0 porin D protein.
ACCESSION CP003190-1348
PROTEIN_ID AGL83155.1
SOURCE Pseudomonas protegens CHA0
ORGANISM Pseudomonas protegens CHA0
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Genome Sequence of Pseudomonas protegens CHA0
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2011) Genomic and Applied Microbiology,
Goettingen Genomics Laboratory, Georg-August-University Goettingen,
Grisebachstrasse 8, Goettingen, Lower Saxony 37077, Germany
COMMENT Source DNA of Pseudominas protegens CHA0 is available at the
Institute of Integrative Biology (IBZ), Plant Pathology, Swiss
Federal Institute of Technology Zuerich, Universitaetsstrasse 2,
CH-8092 Zuerich (monika.maurhofer@usys.ethz.ch).
##Genome-Assembly-Data-START##
Assembly Method :: MIRA assembler v. 3.4.0.1
Genome Coverage :: 5X (454); 100X (Illumina)
Sequencing Technology :: 454 GS FLX+; Illumina Hiseq; Sanger
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas protegens CHA0"
/mol_type="genomic DNA"
/strain="CHA0"
/type_material="type strain of Pseudomonas protegens"
/db_xref="taxon:1124983"
protein /gene="oprD4"
/locus_tag="PFLCHA0_c13650"
/EC_number="3.4.21.-"
/transl_table=11
BEGIN
1 MALALSSPAL PALAAESGFL EDAQANLTLR NFYFNRNFTN PTKAQGKAEE WTQSFILDAK
61 SGFTQGTVGF GMDVLGLYSL KLDGGKGTGG TQLLPLDHDG RPADNFGRLG VAFKARLSQT
121 EVKVGEWMPV LPILRSDDGR SLPQTFRGGQ ITSKEIAGLT LYGGQFRANS PRDDSSMSDM
181 SMFGKAAFTS DRFNFQGAEY AFNDKRTQIA LWNAQLKDIY SQQFVNLIHS QPLGDWTLGA
241 NLGFFYGKED GSARAGDMEN RTWSGLFSAK YGGNTFYVGL QKLTGDSAWM RVNGTSGGTL
301 ANDSYNASYD NAKEKSWQVR HDYNFAALGV PGLTLMNRYI SGSNVHTATV SDGKEWGRES
361 EVAYTVQSGT LKNLNLKWRN STMRRDFSNN EFDENRLIIS YPLSLL
//