LOCUS AGL82685.1 468 aa PRT BCT 30-JAN-2014
DEFINITION Pseudomonas protegens CHA0 porin D protein.
ACCESSION CP003190-878
PROTEIN_ID AGL82685.1
SOURCE Pseudomonas protegens CHA0
ORGANISM Pseudomonas protegens CHA0
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Genome Sequence of Pseudomonas protegens CHA0
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2011) Genomic and Applied Microbiology,
Goettingen Genomics Laboratory, Georg-August-University Goettingen,
Grisebachstrasse 8, Goettingen, Lower Saxony 37077, Germany
COMMENT Source DNA of Pseudominas protegens CHA0 is available at the
Institute of Integrative Biology (IBZ), Plant Pathology, Swiss
Federal Institute of Technology Zuerich, Universitaetsstrasse 2,
CH-8092 Zuerich (monika.maurhofer@usys.ethz.ch).
##Genome-Assembly-Data-START##
Assembly Method :: MIRA assembler v. 3.4.0.1
Genome Coverage :: 5X (454); 100X (Illumina)
Sequencing Technology :: 454 GS FLX+; Illumina Hiseq; Sanger
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas protegens CHA0"
/mol_type="genomic DNA"
/strain="CHA0"
/type_material="type strain of Pseudomonas protegens"
/db_xref="taxon:1124983"
protein /gene="oprD2"
/locus_tag="PFLCHA0_c08930"
/EC_number="3.4.21.-"
/transl_table=11
BEGIN
1 MKLSSSALLA LAISSITASA YAENVSQDFV PTELNATSAQ AETKGFIEGQ SLSGTTRNWY
61 ANELKRRNDR FSYNHNGVET STPRRINWVQ GTILNYTSGF TEGTVGVSTE VAAYNAIALD
121 RDRKDIAGKN NRTLTHSDGD AVGQWSKLGL ANVKFRVSNT TLTAGRQNFS TPIVDVIGNR
181 PLPSSFEGVS IHSEEFNNLS FDAGSFDRVS PRTEQSLSKF SSEYNSNGAE TDRVSLVGAN
241 YQPLKSLKTS LYASKVEDFW NQYYFGATHE LGDSSVLSLT TGLNYYKTVD TGKKKMGEID
301 NDTYSLSLGL THQAHSLTFS YQEINGNEYF DYLHETNGIY LANSLLSDFN GPNEKSFQIA
361 YGLNMAEYGV PGLKFNIYQA RGWGIDGTHY NGTAYSGVKA DGTVYGVRTM DGEHHYEYGI
421 GASYAVQSGP LKATAIRATY TTHRASENQA DGNINEFRLV TTIPFNIL
//