LOCUS AGL82622.1 936 aa PRT BCT 30-JAN-2014
DEFINITION Pseudomonas protegens CHA0 glycolate oxidase subunit GlcD protein.
ACCESSION CP003190-815
PROTEIN_ID AGL82622.1
SOURCE Pseudomonas protegens CHA0
ORGANISM Pseudomonas protegens CHA0
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Genome Sequence of Pseudomonas protegens CHA0
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6867980)
AUTHORS Schuldes,J., Thuermer,A., Jousset,A., Keel,C., Maurhofer,M.,
Scheu,S. and Daniel,R.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2011) Genomic and Applied Microbiology,
Goettingen Genomics Laboratory, Georg-August-University Goettingen,
Grisebachstrasse 8, Goettingen, Lower Saxony 37077, Germany
COMMENT Source DNA of Pseudominas protegens CHA0 is available at the
Institute of Integrative Biology (IBZ), Plant Pathology, Swiss
Federal Institute of Technology Zuerich, Universitaetsstrasse 2,
CH-8092 Zuerich (monika.maurhofer@usys.ethz.ch).
##Genome-Assembly-Data-START##
Assembly Method :: MIRA assembler v. 3.4.0.1
Genome Coverage :: 5X (454); 100X (Illumina)
Sequencing Technology :: 454 GS FLX+; Illumina Hiseq; Sanger
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas protegens CHA0"
/mol_type="genomic DNA"
/strain="CHA0"
/type_material="type strain of Pseudomonas protegens"
/db_xref="taxon:1124983"
protein /gene="glcD1"
/locus_tag="PFLCHA0_c08280"
/transl_table=11
BEGIN
1 MSLPTAFLRD AQQLIPPERR FDDPLSTLAF GTDASFYRLI PKLVIRVESE DEVVTLLQLA
61 QRDRVPVTFR AAGTSLSGQA ISDSVLIVLG DNWNGKEIRH QGTQIRLQPG VIGAQANAWL
121 APFGRKIGPD PASINACKIG GIVANNASGM CCGTAQNTYH TLAGIRLVLA DGTRLDTEDE
181 VSIAAFRASH GPLLERLAEL GRSTRANSEL AAKIRHKYRL KNTTGLSLNA LVDFDEPLDI
241 LSHLLVGSEG TLGFISAVTY DTVIDHPNKA SALIVFPDVE TCCNAVTVLK SQPVSAVELL
301 DRRSLRSVQD KPGMPAFVQQ LSANACALLI ESRAASSSLL HEQLAQIMNS LAAFPVEKQV
361 DFTEDPQENA KLWAIRKDTF PAVGAVRKTG TTVIIEDVTF PVEQLAIGVN RLIELFDKHH
421 YDEAILFGHA LEGNLHFVFT QGFNSSEEVN RYQAFMDDVA QLVAVEFGGS LKAEHGTGRN
481 MAPFVELEWG SDAYQLMWQL KRLLDPNGIL NPDVVLSEDP QIHLKHLKPL PAADEIVDKC
541 IECGFCEPVC PSKGLTLSPR QRIVIWRDIQ ARKRAGIDTT ELEAAYQYQG IDTCAATGLC
601 AQRCPVGINT GELVKKLRSE HATHNGTADW LGSHFATTLQ GARFTLHVAN GARMLLGAPR
661 LSKLSASLTR LSKGQVPQWS SAMPQPEKAI RFSPSVSDAR PRVVYLAACV SRVMGPAAGD
721 KEQSSLYEKT RGLLEKAGYQ VVLPDNLDNL CCGQPFASKG YATQAEDKRQ ELIGALLHAS
781 RGGLDPIYCD TSPCTLRLVQ DLGDVRLDLY DPVRFIRTHL LERLEFTPQE APIAVHVTCS
841 TQHLGESQAL IELARRCSNN VVIPEGIHCC GFAGDKGFTT PELNAHSLRS LKDAVQYCSE
901 GISTSRTCEI GLSQHGGIDY HGLVYLVDRV TRAKAV
//