LOCUS AEG54980.1 1152 aa PRT BCT 08-JUN-2015 DEFINITION Sinorhizobium meliloti AK83 pyruvate carboxylase protein. ACCESSION CP002781-3205 PROTEIN_ID AEG54980.1 SOURCE Sinorhizobium meliloti AK83 (Ensifer meliloti AK83) ORGANISM Sinorhizobium meliloti AK83 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. REFERENCE 1 (bases 1 to 3820344) AUTHORS Galardini,M., Pini,F., Bazzicalupo,M., Biondi,E.G. and Mengoni,A. TITLE Replicon-dependent bacterial genome evolution: the case of Sinorhizobium meliloti JOURNAL Genome Biol Evol 5 (3), 542-558 (2013) PUBMED 23431003 REFERENCE 2 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome1 of Sinorhizobium meliloti AK83 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (16-MAY-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4086303 Source DNA and organism available from Emanuele G. Biondi (emanuele.biondi@unifi.it) Contacts: Emanuele G. Biondi (emanuele.biondi@unifi.it) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sinorhizobium meliloti AK83 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Host, Plant root, Root nodule, Soil num_replicons :: 5 ref_biomaterial :: Missing biotic_relationship :: Symbiotic trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05780 Current Finishing Status :: Finished Funding Program :: DOE-CSP 2009 Source of Isolate :: Biondi, Emanuele (Universita di Firenze) Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 25 - 30C Gram Staining :: Gram- Symbiotic Relationship :: Mutualistic Diseases :: None Phenotypes :: Nitrogen cycle, Streptomycin resistant, Symbiotic ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Sinorhizobium meliloti AK83" /mol_type="genomic DNA" /strain="AK83" /db_xref="taxon:693982" /chromosome="1" /collected_by="Emmanuele Biondi" protein /locus_tag="Sinme_3273" /EC_number="6.4.1.1" /inference="protein motif:TFAM:TIGR01235" /note="SMART: Biotin carboxylase, C-terminal; TIGRFAM: Pyruvate carboxylase; KEGG: smd:Smed_3139 pyruvate carboxylase; PFAM: Carboxylase, conserved domain; Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Pyruvate carboxyltransferase; Biotin/lipoyl attachment" /transl_table=11 /db_xref="GO:0004736" /db_xref="InterPro:IPR000089" /db_xref="InterPro:IPR000891" /db_xref="InterPro:IPR003379" /db_xref="InterPro:IPR005479" /db_xref="InterPro:IPR005481" /db_xref="InterPro:IPR005482" /db_xref="InterPro:IPR005930" BEGIN 1 MSISKILVAN RSEIAIRVFR AANELGLKTV AIWAEEDKLA LHRFKADESY QVGRGPHLPR 61 DLGPIESYLS IDEVIRVAKL SGADAIHPGY GLLSESPEFA EACAANGITF IGPKPETMRQ 121 LGNKVAARNL AISIGVPVVP ATEPLPDDPE EIKRLAEEIG YPVMLKASWG GGGRGMRAIR 181 DPKDLIREVT EAKREAKAAF GKDEVYLEKL VERARHVESQ ILGDTHGNVV HLFERDCSIQ 241 RRNQKVVERA PAPYLNDAQR QELADYSLKI ARATNYIGAG TVEYLMDSDT GKFYFIEVNP 301 RIQVEHTVTE VVTGIDIVKA QIHILDGFAI GAPESGVPRQ EDIRLNGHAL QCRITTEDPE 361 QNFIPDYGRI TAYRGATGFG IRLDGGTAYS GAVITRYYDP LLEKVTAWAP NPGEAIQRMI 421 RALREFRIRG VATNLTFLEA IISHPKFHDN SYTTRFIDTT PELFQQVKRQ DRATKLLTYL 481 ADVTVNGHPE VKGRPKPSDD IAAPVVPFTG GDVKPGTKQR LDQLGPKKFA EWVKAQPEVL 541 ITDTTMRDGH QSLLATRMRT YDIARIAGTY ARALPNLFSL ECWGGATFDV SMRFLTEDPW 601 ERLAMVREGA PNLLLQMLLR GANGVGYKNY PDNVVKYFVR QAAKGGIDVF RVFDCLNWVE 661 NMRVAMDAVA EEDRICEAAI CYTGDILNSA RPKYDLKYYT ALAAELEKAG AHMIAVKDMA 721 GLLKPAAARV LFKALKEATG LPIHFHTHDT SGIAAATVLA AVESGVDVVD AAMDALSGNT 781 SQPCLGSIVE ALSGSERDPG LDPEWIRRIS FYWEAVRHQY AAFESDLKGP ASEVYLHEMP 841 GGQFTNLKEQ ARSLGLETRW HEVAQAYADA NRMFGDIVKV TPSSKVVGDM ALMMVSQDLT 901 VADVENPGKD IAFPESVVSM LKGDLGQPPG GWPEALQKKA LKGEEPYDAR PGSLLEDADL 961 DAERKGIEEK LGREVTDFEF ASYLMYPKVF TDYAVACETY GPVSVLPTPA YFYGMAPGEE 1021 LFADIEKGKT LVILNQAQGE IDEKGMVKMF FEMNGQPRSI KVPDRNRGAS AAVRRKAEAG 1081 NAAHLGAPMP GVISTVAVAS GQSVKAGDVL LSIEAMKMET ALHAEKDGVI SEVLVRAGDQ 1141 IDAKDLLVVF GG //