LOCUS AEG54964.1 1023 aa PRT BCT 08-JUN-2015 DEFINITION Sinorhizobium meliloti AK83 helicase domain protein protein. ACCESSION CP002781-3189 PROTEIN_ID AEG54964.1 SOURCE Sinorhizobium meliloti AK83 (Ensifer meliloti AK83) ORGANISM Sinorhizobium meliloti AK83 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. REFERENCE 1 (bases 1 to 3820344) AUTHORS Galardini,M., Pini,F., Bazzicalupo,M., Biondi,E.G. and Mengoni,A. TITLE Replicon-dependent bacterial genome evolution: the case of Sinorhizobium meliloti JOURNAL Genome Biol Evol 5 (3), 542-558 (2013) PUBMED 23431003 REFERENCE 2 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome1 of Sinorhizobium meliloti AK83 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (16-MAY-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4086303 Source DNA and organism available from Emanuele G. Biondi (emanuele.biondi@unifi.it) Contacts: Emanuele G. Biondi (emanuele.biondi@unifi.it) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sinorhizobium meliloti AK83 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Host, Plant root, Root nodule, Soil num_replicons :: 5 ref_biomaterial :: Missing biotic_relationship :: Symbiotic trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05780 Current Finishing Status :: Finished Funding Program :: DOE-CSP 2009 Source of Isolate :: Biondi, Emanuele (Universita di Firenze) Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 25 - 30C Gram Staining :: Gram- Symbiotic Relationship :: Mutualistic Diseases :: None Phenotypes :: Nitrogen cycle, Streptomycin resistant, Symbiotic ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Sinorhizobium meliloti AK83" /mol_type="genomic DNA" /strain="AK83" /db_xref="taxon:693982" /chromosome="1" /collected_by="Emmanuele Biondi" protein /locus_tag="Sinme_3257" /inference="protein motif:PFAM:PF00271" /note="KEGG: smd:Smed_3115 helicase domain-containing protein; PFAM: Helicase, C-terminal; SMART: Helicase, C-terminal" /transl_table=11 /db_xref="GO:0003676" /db_xref="GO:0004386" /db_xref="GO:0005524" /db_xref="InterPro:IPR001650" BEGIN 1 MILSGRGVTA VLGPTNTGKT HYAIERMIAH DSGVIGLPLR LLAREVYTRL VEKVGHHNVA 61 LITGEEKIAP HRARYSVCTV EAMPRETTAS FVAIDEVQLA GDLERGHIFT DRILHLRGRG 121 EMLLLGAATM RPILEYLLPG ITVVERPRMS QLLYAGSKKI TRLPNRSAIV AFSADEVYAI 181 AELIRRQRGG AAVVLGALSP RTRNAQVALY QEGDVDYLVA TDAIGMGLNL DVDHVAFAQD 241 RKFDGYQYRN LNPAELAQVA GRAGRHVRDG TFGVTGRVDP FDEDLVHRIE SHEFDPVRVL 301 QWRSKALDFS SLKALRKSLE AAPAVSGLAR ALPAVDQQAL EHLTRYPEIV DVATASERVE 361 KLWEACALPD YRRITPAQHA DLISTIYADL VRHGTVNEDF MAEQVRRADH TDGEIDTLSA 421 RIAQIRTWTY VSNRPGWLAD PTHWQEKTRE IEDRLSDALH ERLTKRFVDR RTSVLMKRLR 481 ENAMLEAEIS VNGDVFVEGH HVGQLAGFRF TLAAGSEGTD AKAVQGAAHK ALALEFEARA 541 ARLHAAGNGD LALSSDGLVR WLGDPVARLT ASDHVMRPRV ILLADEQLQA NAREHVLARI 601 ERFVNHHIST VLKPLDDISR AEDLEGLAKG LAFQIVENLG VLFRRDVAEE VKSLDQESRA 661 SIRRYGVRFG AYHIFLPALL KPAPAELITL LWALKNDGLD KPGYGELIPM LAAGRTSVVT 721 DPSFERTFYK LAGFRFLGKR AVRIDILERL ADLIRPLLQW KPGTSPRPDG AYDGRRFVAT 781 TSMLSILGAT PDDMEEILKG LGYRADAVTA EEAAAFLASQ NGETAPAEEA GASVADAGSV 841 EAEAADAPTA ETEATGTAAA EAPAAPAAET EAADTAAAET QAAPAGDDAA APAEPEAPAE 901 AKPVLLWRPG TRQDNQRQGG RQGEQRRGGQ RHGQTEGREG GRRQAPHGKS QGKSQGKPWE 961 GKPQEGKGSE GRPGGQRKDR GDRHDRNKSS PPKFEGRPPR KEKPIDPDSP FAKLAALKEQ 1021 MKK //