LOCUS AEE87163.1 294 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana homeobox protein 16 protein.
ACCESSION CP002687-7421
PROTEIN_ID AEE87163.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="HB16"
/locus_tag="AT4G40060"
/gene_synonym="ATHB-16"
/gene_synonym="ATHB16"
/gene_synonym="homeobox protein 16"
/gene_synonym="T5J17.230"
/gene_synonym="T5J17_230"
/inference="Similar to RNA sequence,
EST:INSD:BP802472.1,INSD:BP622739.1,INSD:EL044992.1,
INSD:ES099613.1,INSD:ES024566.1,INSD:BP573595.1,
INSD:AV535046.1,INSD:W43130.1,INSD:AV816284.1,
INSD:BP566006.1,INSD:BP858132.1,INSD:BP635977.1,
INSD:ES090823.1,INSD:BP850709.1,INSD:BP576633.1,
INSD:EL304427.1,INSD:DR378850.1,INSD:BP570605.1,
INSD:DR750674.1,INSD:ES149722.1,INSD:ES190978.1,
INSD:ES007103.1,INSD:EL976043.1,INSD:AV811475.1,
INSD:EH982498.1,INSD:ES040229.1,INSD:ES198999.1,
INSD:BX839730.1,INSD:EH925091.1,INSD:ES074580.1,
INSD:EH895487.1,INSD:AV829188.1,INSD:ES134623.1,
INSD:AA395823.1,INSD:BP626915.1,INSD:EL257790.1,
INSD:BP801151.1,INSD:EL231780.1,INSD:ES154649.1,
INSD:BP562349.2,INSD:EL315421.1,INSD:AI997227.1,
INSD:ES107695.1,INSD:DR750409.1,INSD:BP666013.1,
INSD:AV816835.1,INSD:ES046711.1,INSD:EL993450.1,
INSD:EL019304.1,INSD:EL986925.1,INSD:AV560249.1,
INSD:BP585659.1,INSD:AV562269.1,INSD:BP579535.1,
INSD:EH964013.1,INSD:ES129135.1,INSD:BP570397.1,
INSD:ES070416.1,INSD:ES159636.1,INSD:DR240655.1,
INSD:ES047989.1,INSD:AV819018.1,INSD:EL992139.1,
INSD:ES030136.1,INSD:DR750675.1,INSD:BP850502.1,
INSD:R86816.1,INSD:EH886926.1,INSD:EH884321.1,
INSD:BP609077.1,INSD:BP576258.1,INSD:AV832064.1,
INSD:EL330614.1,INSD:EL976552.1,INSD:AV814515.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX827122.1,INSD:BX827123.1,INSD:AF370620.1,
INSD:BX826883.1,INSD:AY054571.1,INSD:AY128917.1"
/note="homeobox protein 16 (HB16); FUNCTIONS IN:
sequence-specific DNA binding, transcription activator
activity, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: in 6 processes; LOCATED IN:
nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Homeobox, conserved site (InterPro:IPR017970), Homeobox
(InterPro:IPR001356), Homeodomain-like
(InterPro:IPR009057), Helix-turn-helix motif, lambda-like
repressor (InterPro:IPR000047), Leucine zipper,
homeobox-associated (InterPro:IPR003106),
Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis
thaliana protein match is: homeobox protein 6
(TAIR:AT2G22430.1); Has 9713 Blast hits to 9689 proteins
in 534 species: Archae - 2; Bacteria - 4; Metazoa - 7673;
Fungi - 210; Plants - 1646; Viruses - 5; Other Eukaryotes
- 173 (source: NCBI BLink)."
/db_xref="TAIR:AT4G40060"
/db_xref="Araport:AT4G40060"
intron_pos 19:1 (1/2)
intron_pos 148:0 (2/2)
BEGIN
1 MKRLSSSDSM CGLISTSTDE QSPRGYGSNY QSMLEGYDED ATLIEEYSGN HHHMGLSEKK
61 RRLKVDQVKA LEKNFELENK LEPERKTKLA QELGLQPRQV AVWFQNRRAR WKTKQLEKDY
121 GVLKGQYDSL RHNFDSLRRD NDSLLQEISK IKAKVNGEED NNNNKAITEG VKEEEVHKTD
181 SIPSSPLQFL EHSSGFNYRR SFTDLRDLLP NSTVVEAGSS DSCDSSAVLN DETSSDNGRL
241 TPPVTVTGGS FLQFVKTEQT EDHEDFLSGE EACGFFSDEQ PPSLHWYSAS DHWT
//