LOCUS AEE87147.1 316 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Haloacid dehalogenase-like hydrolase
(HAD) superfamily protein protein.
ACCESSION CP002687-7402
PROTEIN_ID AEE87147.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G39970"
/gene_synonym="T5J17.140"
/gene_synonym="T5J17_140"
/inference="Similar to RNA sequence,
EST:INSD:BE524543.1,INSD:EH839963.1,INSD:DR201614.1,
INSD:EL132496.1,INSD:DR201606.1,INSD:DR201611.1,
INSD:BP631313.1,INSD:DR201603.1,INSD:DR201585.1,
INSD:BP663143.1,INSD:EL146263.1,INSD:AV792921.1,
INSD:ES096646.1,INSD:AV557778.1,INSD:EH866601.1,
INSD:EL191410.1,INSD:BP830112.1,INSD:EL275097.1,
INSD:BP777534.1,INSD:DR201598.1,INSD:EL158560.1,
INSD:EH886386.1,INSD:EG482390.1,INSD:EH861377.1,
INSD:DR201595.1,INSD:DR201594.1,INSD:EH989498.1,
INSD:BP602141.1,INSD:CB255925.1,INSD:EL088991.1,
INSD:DR201612.1,INSD:EG503947.1,INSD:DR375964.1,
INSD:EL001761.1,INSD:EL063378.1,INSD:DR201599.1,
INSD:EL039263.1,INSD:EH888047.1,INSD:DR201609.1,
INSD:BE529956.1,INSD:ES180532.1,INSD:DR201589.1,
INSD:EH897719.1,INSD:EL145726.1,INSD:AI995913.1,
INSD:F14321.1,INSD:DR201584.1,INSD:DR201608.1,
INSD:DR201610.1,INSD:DR201613.1,INSD:EH868523.1,
INSD:EG482388.1,INSD:EL026957.1,INSD:BP662012.1,
INSD:DR201590.1,INSD:DR378124.1,INSD:EH916645.1,
INSD:DR201586.1,INSD:BP818567.1,INSD:BP794865.1,
INSD:EH934277.1,INSD:DR201605.1,INSD:CA781876.1,
INSD:DR201600.1,INSD:EH860158.1,INSD:DR201587.1,
INSD:DR201597.1,INSD:BP781507.1,INSD:EL077271.1,
INSD:AV807629.1,INSD:EL288096.1,INSD:AV530913.1,
INSD:EH986981.1,INSD:EH833409.1,INSD:AV785178.1,
INSD:EL254276.1,INSD:EL062129.1,INSD:DR201601.1,
INSD:AV824044.1,INSD:DR201591.1,INSD:EL340585.1,
INSD:EL008132.1,INSD:BP817012.1,INSD:EH811409.1,
INSD:AV787302.1,INSD:DR201604.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY143856.1,INSD:AY087649.1,INSD:AK176082.1,
INSD:BX827008.1,INSD:AK175865.1,INSD:AK175831.1,
INSD:AY127008.1,INSD:BX829080.1"
/note="Haloacid dehalogenase-like hydrolase (HAD)
superfamily protein; FUNCTIONS IN: hydrolase activity,
catalytic activity; INVOLVED IN: metabolic process;
LOCATED IN: chloroplast, chloroplast stroma, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Haloacid dehalogenase-like hydrolase (InterPro:IPR005834),
HAD-superfamily hydrolase, subfamily IA, variant 3
(InterPro:IPR006402); BEST Arabidopsis thaliana protein
match is: Haloacid dehalogenase-like hydrolase (HAD)
superfamily protein (TAIR:AT3G48420.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G39970"
/db_xref="Araport:AT4G39970"
intron_pos 159:0 (1/9)
intron_pos 174:0 (2/9)
intron_pos 191:0 (3/9)
intron_pos 216:0 (4/9)
intron_pos 227:1 (5/9)
intron_pos 246:0 (6/9)
intron_pos 266:0 (7/9)
intron_pos 286:0 (8/9)
intron_pos 301:2 (9/9)
BEGIN
1 MAVSCNHSAI LFSPSSTAGS SSVTSSSSLI GFPRFQTLRF KSRSVYSKSR VSSPVSALPL
61 RSLEALIFDC DGVILESENL HRQAYNDAFS HFDVRCPPSS SESLDWSLEF YDKFQNLVGG
121 GKPKMRWYFK ENGWPTSTIF DSPPQNDDDR AKLIDTLQDW KTERYKEIIK SGSVEPRPGV
181 IRLMDEAKAA GKKLAVCSAA TKSSVILCLE NLIDIERFQG LDCFLAGDDV KEKKPDPSIY
241 ITAAEKLGVS VKDCLVVEDS VIGLQAATKA GMSCVITYTS STSDQNFNDA IAVYPDLSNV
301 KLKDLETLLQ TIVTAA
//