LOCUS AEE87136.1 371 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ubiquitin-specific protease 3 protein.
ACCESSION CP002687-7389
PROTEIN_ID AEE87136.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="UBP3"
/locus_tag="AT4G39910"
/gene_synonym="ATUBP3"
/gene_synonym="T5J17.80"
/gene_synonym="T5J17_80"
/gene_synonym="ubiquitin-specific protease 3"
/inference="Similar to RNA sequence,
EST:INSD:EL306505.1,INSD:EG452130.1,INSD:CK117551.1,
INSD:AA598123.1,INSD:AI994233.1,INSD:ES139958.1,
INSD:EL984360.1,INSD:BP660286.1,INSD:BP851151.1,
INSD:BX835753.1,INSD:ES105675.1,INSD:T41913.1,
INSD:AV796857.1,INSD:EL025756.1,INSD:ES030701.1,
INSD:BP656970.1,INSD:ES113765.1,INSD:BP647264.1,
INSD:BP787378.1,INSD:BP658646.1,INSD:BP842229.1,
INSD:EL323476.1,INSD:CD529294.1,INSD:R29922.1,
INSD:BP605832.1,INSD:EL044540.1,INSD:ES132861.1,
INSD:DR254122.1,INSD:EL171660.1,INSD:EL037231.1,
INSD:AV809736.1,INSD:ES061045.1,INSD:EH891513.1,
INSD:AV800626.1,INSD:AI100220.1,INSD:AV826954.1,
INSD:EH925806.1,INSD:DR254125.1,INSD:ES000687.1,
INSD:ES045998.1,INSD:DR254123.1,INSD:BP665298.1,
INSD:EL145745.1,INSD:BX839091.1,INSD:EH978724.1,
INSD:BP582502.1,INSD:EH818190.1,INSD:EH894306.1,
INSD:ES216099.1,INSD:BX839015.1,INSD:BP671833.1,
INSD:ES040350.1,INSD:CD531539.1,INSD:BX839040.1,
INSD:EL047246.1,INSD:CD532432.1,INSD:EL072934.1,
INSD:EH917960.1,INSD:EL037325.1,INSD:BP660726.1,
INSD:ES073109.1,INSD:DR254124.1,INSD:EH918123.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX827142.1,INSD:U76845.1,INSD:BX826816.1,
INSD:AY058889.1,INSD:AY079044.1"
/note="ubiquitin-specific protease 3 (UBP3); CONTAINS
InterPro DOMAIN/s: Peptidase C19, ubiquitin
carboxyl-terminal hydrolase 2, conserved site
(InterPro:IPR018200), Peptidase C19, ubiquitin
carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST
Arabidopsis thaliana protein match is: ubiquitin-specific
protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G39910"
/db_xref="Araport:AT4G39910"
intron_pos 40:0 (1/5)
intron_pos 79:0 (2/5)
intron_pos 112:0 (3/5)
intron_pos 178:0 (4/5)
intron_pos 238:2 (5/5)
BEGIN
1 MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS
61 VADAEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK QNELFRSYMH QDAHEFLNYL
121 LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL
181 TNETRCLRCE TVTARDETFL DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ
241 EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301 FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY
361 ILFYESLGPT K
//