LOCUS AEE87131.1 394 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TLD-domain containing nucleolar protein
protein.
ACCESSION CP002687-7384
PROTEIN_ID AEE87131.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G39870"
/gene_synonym="T5J17.40"
/gene_synonym="T5J17_40"
/inference="Similar to RNA sequence,
EST:INSD:ES058817.1,INSD:BX838087.1,INSD:BP612373.1,
INSD:EL978519.1,INSD:EH863985.1,INSD:ES025541.1,
INSD:ES150542.1,INSD:BP602112.1,INSD:ES038977.1,
INSD:AV829100.1,INSD:AV804395.1,INSD:ES197903.1,
INSD:ES017808.1,INSD:BP854209.1,INSD:ES116958.1,
INSD:ES144713.1,INSD:ES092552.1,INSD:ES002517.1,
INSD:ES196087.1,INSD:ES192903.1,INSD:ES058638.1,
INSD:ES133947.1,INSD:AI998598.1,INSD:ES071727.1,
INSD:EL981712.1,INSD:BP636130.1,INSD:AV549655.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX827425.1,INSD:AY065400.1,INSD:BT002324.1,
INSD:BX827972.1"
/note="TLD-domain containing nucleolar protein; CONTAINS
InterPro DOMAIN/s: TLDc (InterPro:IPR006571); BEST
Arabidopsis thaliana protein match is: TLD-domain
containing nucleolar protein (TAIR:AT2G05590.2); Has 2250
Blast hits to 2105 proteins in 277 species: Archae - 0;
Bacteria - 56; Metazoa - 1073; Fungi - 317; Plants - 190;
Viruses - 32; Other Eukaryotes - 582 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G39870"
/db_xref="Araport:AT4G39870"
intron_pos 41:0 (1/7)
intron_pos 237:2 (2/7)
intron_pos 262:0 (3/7)
intron_pos 288:0 (4/7)
intron_pos 309:1 (5/7)
intron_pos 338:2 (6/7)
intron_pos 367:0 (7/7)
BEGIN
1 MGKHKSFRSK AVHFVTDLTA GLLNPISDKP SSAHPPPPLP DEEDESKRNQ LESTTAEQPK
61 DLVDEPDTSS FSAFLGSLLS SDPKDKRKDQ DPEDEEDEEE DEEEDSEAET SDTSSSSANP
121 TRTMKETTSG GAAKKSFLSK YKQHFRNFYQ AVKFPGVKER KGNSDVIPDD EETEYYDGLE
181 MKPMQNNNVK EEVTVVVQAI IPEISEPSLL LSEQSRRSLY TSLPALVQGR KWILLYSTWR
241 HGISLSTLYR KSLLWPGLSL LVVGDRKGSV FGGLVEAPLI PTDKKYQGTN STFVFTNKSG
301 QPTIYRPTGA NRFYTLCSKE FLALGGGGRF ALYLDSELLS GSSAYSETYG NSCLADSQDF
361 DVKEVELWGF VYGSKYDEIL AHSKTMEPGL CRWS
//