LOCUS AEE87011.1 280 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA-binding CRS1 / YhbY (CRM) domain
protein protein.
ACCESSION CP002687-7228
PROTEIN_ID AEE87011.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G39040"
/gene_synonym="CFM4"
/gene_synonym="CRM family member subfamily 4"
/gene_synonym="F19H22.140"
/gene_synonym="F19H22_140"
/inference="Similar to RNA sequence,
EST:INSD:DR320023.1,INSD:BP849703.1,INSD:BP568876.1,
INSD:EL255554.1,INSD:ES008692.1,INSD:ES178028.1,
INSD:DR358190.1,INSD:AV536734.1,INSD:EL201822.1,
INSD:EH809599.1,INSD:T45540.1,INSD:DR320026.1,
INSD:ES058687.1,INSD:EL322945.1,INSD:ES174805.1,
INSD:EL206359.1,INSD:DR320021.1,INSD:EL295652.1,
INSD:EL229008.1,INSD:ES127563.1,INSD:ES036463.1,
INSD:ES063305.1,INSD:EH842099.1,INSD:BP836641.1,
INSD:DR320028.1,INSD:BP849560.1,INSD:AU239377.1,
INSD:EL053186.1,INSD:R84014.1,INSD:ES094367.1,
INSD:AV550150.1,INSD:EH966968.1,INSD:EL157199.1,
INSD:DR358189.1,INSD:ES035977.1,INSD:ES051467.1,
INSD:DR358188.1,INSD:AV560497.1,INSD:AV540456.1,
INSD:EL126187.1,INSD:EH855172.1,INSD:EL996178.1,
INSD:EH961170.1,INSD:EL257749.1,INSD:AV533454.1,
INSD:EG486402.1,INSD:BP858791.1,INSD:BP856324.1,
INSD:DR320024.1,INSD:BP818429.1,INSD:DR320025.1,
INSD:ES172305.1,INSD:DR320022.1,INSD:DR320029.1,
INSD:AV441486.1,INSD:EH891853.1,INSD:EH915963.1,
INSD:Z29195.1,INSD:EL216692.1,INSD:EH894719.1,
INSD:EL157231.1,INSD:ES041167.1,INSD:ES105261.1,
INSD:ES088609.1,INSD:DR320027.1,INSD:DR358187.1,
INSD:EH979222.1,INSD:ES077676.1,INSD:ES094349.1"
/note="RNA-binding CRS1 / YhbY (CRM) domain protein;
FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process
unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: RNA-binding, CRM domain
(InterPro:IPR001890); BEST Arabidopsis thaliana protein
match is: RNA-binding CRS1 / YhbY (CRM) domain protein
(TAIR:AT2G21350.1); Has 7808 Blast hits to 5439 proteins
in 1394 species: Archae - 38; Bacteria - 2293; Metazoa -
2592; Fungi - 448; Plants - 290; Viruses - 198; Other
Eukaryotes - 1949 (source: NCBI BLink)."
/db_xref="TAIR:AT4G39040"
/db_xref="Araport:AT4G39040"
intron_pos 202:0 (1/2)
intron_pos 275:0 (2/2)
BEGIN
1 MERVTASASC SSTHLIHNLL RHPKPPSPVC LFLRPFCFSA SVSQSNHRNK PRFQSFSSKP
61 LPCHSASLVV KSFSSIDEPD LEEDEESEDE DFSAEEYEYE DEEEEDEQDS GVVVSERGIE
121 DSEASEEVSE IGDKEEKTEN TKKKKSRGSA LKLSIKEKKE LASYAHSLGD KLKCQLVGKS
181 GVTDSVVFSF LETLEKNELL KVKIRKTSPD ELEDAVQHLE EATGSVAVGQ IGRTVILYRP
241 SPTKMKAEAK KKEVERMSIT RRQKYANTRP TKPFRVFRET
//