LOCUS AEE86987.1 691 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana FMN-linked oxidoreductases superfamily
protein protein.
ACCESSION CP002687-7192
PROTEIN_ID AEE86987.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G38890"
/gene_synonym="F19H22.4"
/inference="Similar to RNA sequence,
EST:INSD:EL978115.1,INSD:EH957754.1,INSD:EH956430.1,
INSD:AU230612.1,INSD:ES178638.1,INSD:EL995331.1,
INSD:DR297401.1,INSD:ES073284.1,INSD:EH915770.1,
INSD:EL262840.1,INSD:DR380000.1,INSD:EH913758.1,
INSD:EL094964.1,INSD:EL212037.1,INSD:ES117902.1,
INSD:DR297400.1,INSD:ES111935.1,INSD:ES140346.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT006228.1,INSD:AK118455.1"
/note="FMN-linked oxidoreductases superfamily protein;
FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD
binding, catalytic activity, zinc ion binding, nucleic
acid binding; INVOLVED IN: oxidation reduction, tRNA
processing, metabolic process; LOCATED IN: vacuole;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger,
CCCH-type (InterPro:IPR000571), Aldolase-type TIM barrel
(InterPro:IPR013785), tRNA-dihydrouridine synthase
(InterPro:IPR001269), tRNA-dihydrouridine synthase,
conserved site (InterPro:IPR018517); BEST Arabidopsis
thaliana protein match is: Aldolase-type TIM barrel family
protein (TAIR:AT3G49640.1); Has 11364 Blast hits to 11268
proteins in 2588 species: Archae - 15; Bacteria - 7817;
Metazoa - 496; Fungi - 531; Plants - 173; Viruses - 0;
Other Eukaryotes - 2332 (source: NCBI BLink)."
/db_xref="TAIR:AT4G38890"
/db_xref="Araport:AT4G38890"
intron_pos 94:0 (1/9)
intron_pos 131:0 (2/9)
intron_pos 207:0 (3/9)
intron_pos 289:1 (4/9)
intron_pos 378:0 (5/9)
intron_pos 469:0 (6/9)
intron_pos 563:0 (7/9)
intron_pos 603:1 (8/9)
intron_pos 660:0 (9/9)
BEGIN
1 MSDVIAEHAV DTSVEGDAKA ALPVQSTKQF SVYEATSEEL IERSMAPIKK EFLCPPPPSR
61 SVKQNDAADV RAPQSGLVQE KKSKRQLKRE RREQSTINLC PQVARTEDVD SCQYKDKCRF
121 NHDIEAFKAQ KADDIEGQCP FVASGMKCAY GLSCRFLGSH RDITGNSDDK EKSEMNFFNK
181 ETQRLLWKNK MTFTNADAKL KSLGLLGHAK KSNAAEEITA EKTQNGMNGT QATEVAVDSA
241 VSSEHTSEMI QDVDIPGPLE TEEVRPMKKA KSEDQKNSKT GDVGGVYDGV KLEEETKKNG
301 YPTSKANVED EDSIKIVETD SSLKLHPREK KKLIDFRDKL YLAPLTTVGN LPFRRLCKVL
361 GADVTCGEMA MCTNLLQGQA SEWALLRRHS SEDLFGVQIC GSYPDTVSRV VELIDRECTV
421 DFIDINMGCP IDMVVNKSAG SALLNKPLRM KNIVEVSSSI VETPITIKVR TAFFEGKNRI
481 DSLIADIGNW GATAVTIHGR SRQQRYSKSA DWDYIYQCTK NATTNLQVIG NGDVYSYLDW
541 NKHKSDCPEL SSCMIARGAL IKPWIFTEIK EQRHWDITSG ERLNIMKDFV RFGLQHWGSD
601 TKGVETTRHF LLEWLSYTFR YIPVGLLDVI PQQINWRPPS YFGRDDLETL MMSESAGDWV
661 RISEMLLGKV PEGFTFAPKH KSNAYDRAEN G
//