LOCUS AEE86978.1 375 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Calcium-binding EF-hand family protein
protein.
ACCESSION CP002687-7182
PROTEIN_ID AEE86978.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G38810"
/gene_synonym="T9A14.90"
/gene_synonym="T9A14_90"
/inference="Similar to RNA sequence,
EST:INSD:AV441530.1,INSD:AV545623.1,INSD:EH986735.1,
INSD:EL223860.1,INSD:EL021477.1,INSD:EL316842.1,
INSD:BP818220.1,INSD:EL324800.1,INSD:ES163211.1,
INSD:EH837371.1,INSD:EH860522.1,INSD:BP570777.1,
INSD:BP577988.1,INSD:DR368408.1,INSD:EH979167.1,
INSD:DR356402.1,INSD:DR381159.1,INSD:EL150536.1,
INSD:BP636037.1,INSD:AV554423.1,INSD:EL163176.1,
INSD:EL278695.1,INSD:BP566117.1,INSD:AV826469.1,
INSD:EL061375.1,INSD:BP621907.1,INSD:EL065361.1,
INSD:EL302231.1,INSD:EL211628.1,INSD:AV814246.1,
INSD:DR356763.1,INSD:BP571394.1,INSD:EL084003.1,
INSD:BP633058.1,INSD:EL054700.1,INSD:DR382846.1,
INSD:BP629582.1,INSD:AV795058.1,INSD:Z48404.1,
INSD:BP636127.1,INSD:BP570750.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY128892.1,INSD:AY056249.1,INSD:BX827530.1"
/note="Calcium-binding EF-hand family protein; FUNCTIONS
IN: calcium ion binding; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
EF-Hand 1, calcium-binding site (InterPro:IPR018247),
EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand
(InterPro:IPR002048); BEST Arabidopsis thaliana protein
match is: calcium-binding EF hand family protein
(TAIR:AT5G28830.1); Has 314 Blast hits to 218 proteins in
23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 310; Viruses - 0; Other Eukaryotes - 4
(source: NCBI BLink)."
/db_xref="TAIR:AT4G38810"
/db_xref="Araport:AT4G38810"
intron_pos 83:0 (1/4)
intron_pos 183:0 (2/4)
intron_pos 258:0 (3/4)
intron_pos 301:0 (4/4)
BEGIN
1 MDLKSNNHQQ QQQVLDGSDI VELVENEKVF DKFVEQKFQQ LDQDEDGKLS VTELQPAVAD
61 IGAALGLPAQ GTSPDSDHIY SEVLNEFTHG SQEKVSKTEF KEVLSDILLG MAAGLKRDPI
121 VILRMDGEDL SEFVHGPGYE IESISVFSEL SSSKDASLRD CIVKALQSLS VDHGMPPSND
181 PWVMSNIVEP IVDSCLDEED KREKSASQER FLEAFKRVVE SVAQRLNEQP VIVAHSENTF
241 DGSGIRRLLS NKFEFDKALN VAMETIPKDR QGKVSKGYLR AVLDTVAPSA TLPPIGAVSQ
301 MDNMIMEALK MVNGDDGNVV KEEEFKKTMA EILGSIMLQL EGSPISVSSN SVVHEPLTSA
361 TFLPSTSTDT EEPSN
//