LOCUS AEE86928.1 548 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana rho guanyl-nucleotide exchange factor
1 protein.
ACCESSION CP002687-7121
PROTEIN_ID AEE86928.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="ROPGEF1"
/locus_tag="AT4G38430"
/gene_synonym="ATROPGEF1"
/gene_synonym="F22I13.200"
/gene_synonym="F22I13_200"
/gene_synonym="KINASE PARTNER PROTEIN-LIKE"
/gene_synonym="KPP-LIKE"
/gene_synonym="rho guanyl-nucleotide exchange factor 1"
/gene_synonym="ROP (rho of plants) guanine nucleotide
exchange factor 1"
/inference="Similar to RNA sequence,
EST:INSD:DR296665.1,INSD:EH971138.1,INSD:DR296670.1,
INSD:EH836041.1,INSD:EH817050.1,INSD:DR296657.1,
INSD:AV796323.1,INSD:DR296666.1,INSD:DR296651.1,
INSD:EH986467.1,INSD:BP837956.1,INSD:ES206326.1,
INSD:ES193371.1,INSD:ES102628.1,INSD:BP811470.1,
INSD:EH973796.1,INSD:DR296667.1,INSD:DR296660.1,
INSD:ES177765.1,INSD:DR296664.1,INSD:AV799342.1,
INSD:AI993831.1,INSD:AV820393.1,INSD:EL174108.1,
INSD:EL175991.1,INSD:ES109688.1,INSD:ES201949.1,
INSD:ES147176.1,INSD:EL234478.1,INSD:BP809650.1,
INSD:BP597796.1,INSD:ES073915.1,INSD:EL156440.1,
INSD:EL096880.1,INSD:DR296658.1,INSD:BP829261.1,
INSD:ES085483.1,INSD:AV828334.1,INSD:DR296655.1,
INSD:EL319030.1,INSD:AV802584.1,INSD:ES010788.1,
INSD:DR363055.1,INSD:EH802155.1,INSD:ES084765.1,
INSD:ES000475.1,INSD:DR296653.1,INSD:DR296663.1,
INSD:CF773764.1,INSD:ES195020.1,INSD:BP641161.1,
INSD:EG527215.1,INSD:BP822982.1,INSD:DR296661.1,
INSD:BP817387.1,INSD:ES060730.1,INSD:EH812663.1,
INSD:BP811810.1,INSD:BX838819.1,INSD:EH948978.1,
INSD:EL101061.1,INSD:BP656083.1,INSD:BP624035.1,
INSD:BP832404.1,INSD:BP670188.1,INSD:DR296650.1,
INSD:EH966891.1,INSD:AV801118.1,INSD:BP805559.1,
INSD:AA042427.1,INSD:EH966244.1,INSD:ES108339.1,
INSD:AV782069.1,INSD:ES196424.1,INSD:EL237204.1,
INSD:DR296669.1,INSD:ES179833.1,INSD:DR380459.1,
INSD:EL317692.1,INSD:ES142509.1,INSD:DR296656.1,
INSD:EL320753.1,INSD:BP643788.1,INSD:DR296654.1,
INSD:ES105525.1,INSD:EL214571.1,INSD:AV821569.1,
INSD:ES183530.1,INSD:EG527214.1,INSD:BP647307.1,
INSD:EH808855.1,INSD:BX835286.1,INSD:ES204429.1,
INSD:BP574188.1,INSD:BP563500.1,INSD:BP607207.1,
INSD:ES069816.1,INSD:ES061845.1,INSD:DR296652.1,
INSD:EL278721.1,INSD:AV819648.1,INSD:ES121038.1,
INSD:AV807447.1,INSD:AV828725.1,INSD:DR296659.1,
INSD:BP633551.1,INSD:EL999020.1,INSD:DR296668.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX827073.1,INSD:BX827485.1,INSD:BT000975.1,
INSD:AY084995.1,INSD:BT000462.1,INSD:BX828929.1,
INSD:BX827121.1,INSD:AY133649.1,INSD:AY056375.1,
INSD:AY056193.1"
/note="rho guanyl-nucleotide exchange factor 1 (ROPGEF1);
CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger,
PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana
protein match is: RHO guanyl-nucleotide exchange factor 7
(TAIR:AT5G02010.1); Has 308 Blast hits to 304 proteins in
16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 308; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="TAIR:AT4G38430"
/db_xref="Araport:AT4G38430"
intron_pos 90:1 (1/4)
intron_pos 129:1 (2/4)
intron_pos 303:0 (3/4)
intron_pos 421:0 (4/4)
BEGIN
1 MGSLSSEEDD EVSSERCGSY SPSADISESE SSSSFSCHRF DGEGASSSIP SSPRVVAGRG
61 FYFPAPVMLP VIGGKDVVWD DKQPDNDLSE IEMMKERFAK LLLGEDMSGG GKGVCTALAI
121 SNAITNLSAT VFGELWRLEP LAPQKKAMWR RELEWLLCVS DSIVELIPSI QQFPGGGTYE
181 IMETRPRSDL YANLPALKKL DAMLIDMLDA FSDTEFWYTD RGIVLGDCDK DSYNSPASVR
241 QEDKWWLPCP KVPPNGLSEE ARKKLQQCRD FANQILKAAL AINSGVLAEM EIPDPYLETL
301 PKSGKECLGE IIYQYLTANK FSPECLLDCL DLSSEHQTLE IANRIEAAVH VWRQKNGRRH
361 KKQAKLKLSS WGGKVKGLVN DNERNDFLVQ RAETLLQSLR IRFPGLPQTT LDMNKIQYNK
421 DVGQSILESY SRVMESMAFN ITARIDDVLY VDDAMRRSIS VTESLSLFSI NGLNPQKAFS
481 VQSSPHGSPF ATPALSVASR SPRRAPPLYS VKRNGTREKG IVGETEKAWS YAGNLSSRRV
541 TGVTPERD
//