LOCUS AEE86906.1 275 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transport/golgi organization-like
protein (DUF833) protein.
ACCESSION CP002687-7088
PROTEIN_ID AEE86906.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G38260"
/gene_synonym="F22I13.30"
/gene_synonym="F22I13_30"
/inference="Similar to RNA sequence,
EST:INSD:ES171633.1,INSD:BP583642.1,INSD:ES160160.1,
INSD:BP600705.1,INSD:AV784288.1,INSD:EL303918.1,
INSD:BP824233.1,INSD:BP564835.1,INSD:BP567783.1,
INSD:EH913652.1,INSD:BP567468.1,INSD:BP801926.1,
INSD:BP585055.1,INSD:BP583041.1,INSD:BP782263.1,
INSD:BP831321.1,INSD:EH896149.1,INSD:BP812149.1,
INSD:CD530611.1,INSD:BP591000.1,INSD:EL039519.1,
INSD:BP788262.1,INSD:BE528170.1,INSD:ES172130.1,
INSD:EH915526.1,INSD:BE528038.1,INSD:BP656452.1,
INSD:AA586275.1,INSD:BP593504.1,INSD:BP619700.1,
INSD:ES204018.1,INSD:ES205962.1,INSD:BE662841.1,
INSD:ES108158.1,INSD:BP600836.1,INSD:EG454490.1,
INSD:EG499205.1,INSD:DR376218.1,INSD:AV790165.1,
INSD:AV545626.1,INSD:BP846297.1,INSD:BP610526.1,
INSD:BP633654.1,INSD:BP608744.1,INSD:ES194009.1,
INSD:BP864120.1,INSD:AV538102.1,INSD:BP658258.1,
INSD:ES179100.1,INSD:ES184649.1,INSD:ES188759.1,
INSD:BP602512.1,INSD:BP646538.1,INSD:BP588311.1,
INSD:AV554430.1,INSD:BP607378.1,INSD:EL014873.1,
INSD:BP616443.1,INSD:AV806424.1,INSD:AV558366.1,
INSD:ES207311.1,INSD:AV797158.1,INSD:AV518456.1,
INSD:BP798674.1,INSD:EL105149.1,INSD:BP779577.1,
INSD:BP579788.1,INSD:ES203622.1,INSD:BP617670.1,
INSD:ES166289.1,INSD:ES125725.1,INSD:AV821805.1,
INSD:BP599362.1,INSD:EL298865.1,INSD:BP593480.1,
INSD:AV518451.1,INSD:AV790475.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY054681.1,INSD:AY081451.1,INSD:BT012020.1,
INSD:BX827150.1"
/note="Protein of unknown function (DUF833); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF833 (InterPro:IPR008551);
BEST Arabidopsis thaliana protein match is: Protein of
unknown function (DUF833) (TAIR:AT1G20680.2); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G38260"
/db_xref="Araport:AT4G38260"
intron_pos 28:2 (1/4)
intron_pos 90:0 (2/4)
intron_pos 159:0 (3/4)
intron_pos 223:0 (4/4)
BEGIN
1 MCIAVFLWQS HPLYPFLLFL NRDEDHNRAT EALRWWEDGE TVGGRDLVGG GTWLGCTRHG
61 RLAFLTNFKE ASSFPAAKSR GDLPLRYLQS EKSPAEFAEE IQDEISLYNG FNLVVAHVLS
121 KSMIYITNRP PHGDKLVTQV SPGIHVLSNA NLDSPWPKCL RLREGFQQLL AENGSGEFPV
181 KTMVEEVMTN TVKDEETELP HVFTPETEYH LSSIFVDMQR PTGRYGTRSI SAIIVKSHGD
241 GGGDGEICFY ERHLEEGDSW KEHTQQFVII QNQSI
//