LOCUS AEE86892.1 1687 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SEC7-like guanine nucleotide exchange
family protein protein.
ACCESSION CP002687-7071
PROTEIN_ID AEE86892.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G38200"
/gene_synonym="F20D10.320"
/gene_synonym="F20D10_320"
/inference="Similar to RNA sequence,
EST:INSD:ES152098.1,INSD:ES046639.1,INSD:BE844806.1,
INSD:ES076046.1,INSD:EL241205.1,INSD:AI996745.1,
INSD:ES192561.1,INSD:EL982872.1,INSD:EL977278.1,
INSD:ES202385.1,INSD:EL325803.1,INSD:EG483348.1,
INSD:EH854522.1,INSD:AV817845.1,INSD:AV525344.1,
INSD:EL279024.1,INSD:ES200529.1,INSD:ES173955.1,
INSD:EL322043.1,INSD:ES087305.1,INSD:AV567235.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK227209.1"
/note="SEC7-like guanine nucleotide exchange family
protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide
exchange factor activity, guanyl-nucleotide exchange
factor activity; INVOLVED IN: regulation of ARF protein
signal transduction; LOCATED IN: chloroplast; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: SEC7-like
(InterPro:IPR000904), Armadillo-type fold
(InterPro:IPR016024), Protein of unknown function DUF1981,
SEC7 associated (InterPro:IPR015403); BEST Arabidopsis
thaliana protein match is: SEC7-like guanine nucleotide
exchange family protein (TAIR:AT4G35380.1); Has 2912 Blast
hits to 2618 proteins in 244 species: Archae - 0; Bacteria
- 32; Metazoa - 1541; Fungi - 604; Plants - 295; Viruses -
0; Other Eukaryotes - 440 (source: NCBI BLink)."
/db_xref="TAIR:AT4G38200"
/db_xref="Araport:AT4G38200"
intron_pos 327:2 (1/10)
intron_pos 433:2 (2/10)
intron_pos 545:0 (3/10)
intron_pos 686:0 (4/10)
intron_pos 783:2 (5/10)
intron_pos 875:0 (6/10)
intron_pos 1038:2 (7/10)
intron_pos 1146:0 (8/10)
intron_pos 1266:1 (9/10)
intron_pos 1487:0 (10/10)
BEGIN
1 MSSSQNLGGA TRCGRVIGPS LDKIIKNAAW RKHTFLVSAC KSVLDKLEAL SDSPDPSSPL
61 FGLTTSDADA VLQPLLLSLD TGYAKVIEPA LDCSFKLFSL SLLRGEVCSS SPDSLLYKLI
121 HAICKVCGIG EESIELAVLR VLLAAVRSPR ILIRGDCLLH LVRTCYNVYL GGFNGTNQIC
181 AKSVLAQIML IVFTRSEANS MDASLKTVNV NDLLAITDKN VNEGNSVHIC QGFINDVITA
241 GEAAPPPDFA LVQPPEEGAS STEDEGTGSK IREDGFLLFK NLCKLSMKFS SQENTDDQIL
301 VRGKTLSLEL LKVIIDNGGP IWLSDERFLN AIKQLLCLSL LKNSALSVMS IFQLQCAIFT
361 TLLRKYRSGM KSEVGIFFPM LVLRVLENVL QPSFVQKMTV LSLLENICHD PNLIIDIFVN
421 FDCDVESPNI FERIVNGLLK TALGPPPGSS TILSPVQDIT FRHESVKCLV SIIKAMGTWM
481 DQQLSVGDSL LPKSLENEAP ANNHSNSNEE DGTTIDHDFH PDLNPESSDA ATLEQRRAYK
541 IERQKGVTLF NRKPSKGIEF LISSKKVGNS PDEVVSFLRN TTGLNATMIG DYLGEREDFP
601 MKVMHAYVDS FDFKEMNFGE AIRFFLRGFR LPGEAQKIDR IMEKFAERFC KCNPNSFSSA
661 DTAYVLAYSV IMLNTDAHNI MVKEKMTKAD FIRNNRGIDD GKDLPEEYLG ALYDQVVINE
721 IKMSSDSSAP ESRQSNGLNK LLGLDGILNL VYWTQTEEKA VGANGLLIKD IQEKFRSKSG
781 KSESAYHVVT DVAILRFMVE VSWGPMLAAF SVTLDQSDDR LAAVECLRGF RYAVHVTAVM
841 GMQTQRDAFV TSMAKFTNLH CAGDMKQKNV DAVKAIISIA IEDGNHLQDA WEHILTCLSR
901 IEHLQLLGEG APSDASYFAS TETEEKKALG FPNLKKKGAL QNPVMMAVVR GGSYDSSTIG
961 PNMPGLVKQD QINNFIANLN LLDQIGSFQL NNVYAHSQRL KTEAIVAFVK ALCKVSMSEL
1021 QSPTDPRVFS LTKLVEIAHY NMNRIRLVWS RIWSILSDFF VSVGLSENLS VAIFVMDSLR
1081 QLSMKFLERE ELANYNFQNE FLRPFVIVMQ KSSSAEIREL IVRCISQMVL SRVSNVKSGW
1141 KSVFKVFTTA AADERKNIVL LAFETMEKIV REYFSYITET EATTFTDCVR CLITFTNSTF
1201 TSDVSLNAIA FLRFCALKLA DGGLVWNEKG RSSSPSTPVT DDHSPSTQNF MDADENISYW
1261 VPLLTGLSKL TSDSRSAIRK SSLEVLFNIL KDHGHIFSRT FWIGVFSSVI YPIFNSVWGE
1321 NDLLSKDEHS SFPSTFSSHP SEVSWDAETS AMAAQYLVDL FVSFFTVIRS QLSSVVSLLA
1381 GLIRSPAQGP TVAGVGALLR LADELGDRFS ENEWKEIFLA VNEAASLTLS SFMKTLRTMD
1441 DIPDEDTLSD QDFSNEDDID EDSLQTMSYV VARTKSHITV QLQVVQVVTD LYRIHQQSLL
1501 ASHVTVILEI LSSISSHAHQ LNSDLILQKK VRRACSILEL SEPPMLHFEN DTFQNYLDIL
1561 QAIVTNNPGV SLELNVESQL MTVCMQILKM YLKCTLFQGD ELEETRQPKN WILPMGAASK
1621 EEAAARSPLV VAVLKALREL KRDSFKRYAP NFFPLLVELV RSEHSSSQVP QVLSTVFHTC
1681 MGAMMDE
//