LOCUS AEE86853.1 427 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana endoribonuclease E-like protein protein.
ACCESSION CP002687-7015
PROTEIN_ID AEE86853.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G37920"
/gene_synonym="F20D10.40"
/gene_synonym="F20D10_40"
/inference="Similar to RNA sequence,
EST:INSD:BP655111.1,INSD:AV560928.1,INSD:EL199002.1,
INSD:BP815376.1,INSD:EL300425.1,INSD:AU236830.1,
INSD:EH826827.1,INSD:ES146032.1,INSD:BP852850.1,
INSD:BP868991.1,INSD:AU227827.1,INSD:BP828562.1,
INSD:BP645295.1,INSD:BP653173.1,INSD:BP836483.1,
INSD:EH854710.1,INSD:CB261924.1,INSD:T43556.1,
INSD:BP663217.1,INSD:EL133087.1,INSD:EH985997.1,
INSD:BP790438.1,INSD:ES015660.1,INSD:EH923935.1"
/inference="Similar to RNA sequence, mRNA:INSD:BT002988.1"
/note="unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED
IN: chloroplast thylakoid membrane, chloroplast,
chloroplast envelope; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G36320.1); Has 123
Blast hits to 120 proteins in 40 species: Archae - 2;
Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink)."
/db_xref="TAIR:AT4G37920"
/db_xref="Araport:AT4G37920"
intron_pos 62:1 (1/5)
intron_pos 151:0 (2/5)
intron_pos 206:1 (3/5)
intron_pos 288:0 (4/5)
intron_pos 350:2 (5/5)
BEGIN
1 MANLLETSIF FSSADKLLSF PPKNSQTHHL PFSAFINGGR KIRKSSTITF ATDTVTYNGT
61 TSAEVKSSVE DPMEVEVAEG YTMAQFCDKI IDLFLNEKPK VKQWKTYLVL RDEWNKYSVN
121 FYKRCRIRAD TETDPILKQK LVSLESKVKK IDKEMEKHND LLKEIQENPT DINAIAAKRR
181 RDFTGEFFRY VTLLSETLDG LEDRDAVARL ATRCLSAVSA YDNTLESVET LDTAQAKFED
241 ILNSPSVDSA CEKIRSLAKA KELDSSLILL INSAYAAAKE SQTVTNEAKD IMYHLYKATK
301 SSLRSITPKE IKLLKYLLNI TDPEERFSAL ATAFSPGDDH EAKDPKALYT TPKELHKWIK
361 IMLDAYHLNK EETDIKEAKQ MSQPIVIQRL FILKDTIEDE YLDKKTIVAD ETPKKEEEDT
421 TIEDFLN
//