LOCUS AEE86849.1 739 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Zinc finger (C3HC4-type RING finger)
family protein protein.
ACCESSION CP002687-7010
PROTEIN_ID AEE86849.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="EDA40"
/locus_tag="AT4G37890"
/gene_synonym="embryo sac development arrest 40"
/gene_synonym="F20D10.10"
/gene_synonym="F20D10_10"
/inference="Similar to RNA sequence,
EST:INSD:BP616811.1,INSD:AU238130.1,INSD:BP812342.1,
INSD:BP614817.1,INSD:ES159635.1,INSD:BP811675.1,
INSD:BP828322.1,INSD:EL335038.1,INSD:BX836735.1,
INSD:BP819543.1,INSD:AU229267.1,INSD:EG479035.1,
INSD:ES074893.1,INSD:BP831312.1,INSD:BX836270.1,
INSD:AI996207.1,INSD:BP808372.1,INSD:EG479036.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK117301.1,INSD:BT005963.1"
/note="embryo sac development arrest 40 (EDA40); FUNCTIONS
IN: ubiquitin-protein ligase activity, zinc ion binding;
INVOLVED IN: polar nucleus fusion; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc
finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957), von Willebrand factor,
type A (InterPro:IPR002035); BEST Arabidopsis thaliana
protein match is: Zinc finger (C3HC4-type RING finger)
family protein (TAIR:AT2G22680.1); Has 927 Blast hits to
854 proteins in 205 species: Archae - 0; Bacteria - 269;
Metazoa - 39; Fungi - 123; Plants - 345; Viruses - 0;
Other Eukaryotes - 151 (source: NCBI BLink)."
/db_xref="TAIR:AT4G37890"
/db_xref="Araport:AT4G37890"
BEGIN
1 MMNGLRRTFW SSIHKKKDNN RVDDSLDRQK PTTTSRFGFF SNPSTPRSET RPDSVTCSPT
61 IPCQSWSATA ISTPSPSLPA SPKLQCDTSG DVTPTRNRSP LSFLSVSSSS STPSSPKSPA
121 SFSLLKSKLC FTKVRILNRN NQVNIFKNNS KLTFLRLCYE QSSISSSKCG ICLQSAKAGR
181 GTAIFTAECS HTFHFPCVAS RAGDRNLLSD CPVCGASWRE TSLLPLSLSS SLHESGSESD
241 SKIRESKNNN KSLRVYNDDE PLISSPISRT GFNTIPESNE DEEEEDNDDG EFKGFYVNTP
301 SPLTTKKMLT DSVTGHVDVK LSSEAAIVAV GRGNETYSVL MKIKSPSLPT ARRSPVDLVT
361 VIDVSGGNIE MVKRAMRQVI SSLRETDRLS MVSFSSSSKR LTPLRRMTAN GRRLARRIVD
421 DISGDGDGMS VNDAVKKAAK VIEDRRQKNL FTTIFVLTDR NRNSAHQAQL AQPDFVTSTR
481 FSHLEIPTHT IWLGACNHAL PEDVFAKRIK SLLSLSVQDL TLNLGLVSGS GQGKVTSVYS
541 LSGRPVWLGS GLIRLGDMYG DEEREVLVEL KSPSSSRSQR IMTVRSRHVD PTTQEIKNYE
601 DRALMIPRPT TVRSSDPSIA RLRNLHVSTR AVAESRRLVE VNDYSGAERM LTSARALLVQ
661 YGLSSSDSCL RGLEAELADL NRLRGRHVAV KSPEPVVQKS EPLTPTSAWR AAERLAKVAI
721 MRKHMNRVSD LHGFENARF
//