LOCUS AEE86848.1 388 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana LisH/CRA/RING-U-box domains-containing
protein protein.
ACCESSION CP002687-7008
PROTEIN_ID AEE86848.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G37880"
/gene_synonym="T28I19.160"
/gene_synonym="T28I19_160"
/inference="Similar to RNA sequence,
EST:INSD:DR282774.1,INSD:AV442520.1,INSD:EL035630.1,
INSD:BP578384.1,INSD:EL170973.1,INSD:EL289995.1,
INSD:CK118173.1,INSD:BP801988.1,INSD:EL185284.1,
INSD:BP663572.1,INSD:BP621195.1,INSD:EH916187.1,
INSD:BP619406.1,INSD:EL069458.1,INSD:AU235309.1,
INSD:DR282773.1,INSD:BP563414.1,INSD:DR282772.1,
INSD:EH933809.1,INSD:BP826304.2,INSD:ES065488.1,
INSD:DR282770.1,INSD:EL015994.1,INSD:BP575140.1,
INSD:T45837.1,INSD:EH875629.1,INSD:EL236757.1,
INSD:EL163605.1,INSD:EL249107.1,INSD:BP569400.1,
INSD:DR380111.1,INSD:AU225976.1,INSD:EL093175.1,
INSD:AA042181.1,INSD:BP602555.1,INSD:BP798160.1,
INSD:BP867083.1,INSD:EL988583.1,INSD:EL163493.1,
INSD:EH868125.1,INSD:EH966686.1,INSD:EL085159.1,
INSD:BP845626.1,INSD:BP582803.1,INSD:EL028165.1,
INSD:BP811332.1,INSD:EL271038.1,INSD:EL069642.1,
INSD:EH796905.1,INSD:EH908146.1,INSD:BP821801.2,
INSD:ES093602.1,INSD:EL235958.1,INSD:AV441360.1,
INSD:BP600077.1,INSD:ES055832.1,INSD:EH828287.1,
INSD:EH991225.1,INSD:BP643423.1,INSD:EL160048.1,
INSD:EL106710.1,INSD:EH890917.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK227334.1,INSD:BX827487.1,INSD:BX827296.1,
INSD:BT021138.1,INSD:BX827468.1,INSD:BX826381.1,
INSD:BT020222.1"
/note="LisH/CRA/RING-U-box domains-containing protein;
FUNCTIONS IN: zinc ion binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran
binding protein, CRA domain (InterPro:IPR019589), Zinc
finger, RING-type (InterPro:IPR001841), CTLH, C-terminal
LisH motif (InterPro:IPR006595), LisH dimerisation motif
(InterPro:IPR006594), Ran binding protein-like, CRA domain
(InterPro:IPR013144); BEST Arabidopsis thaliana protein
match is: zinc ion binding (TAIR:AT2G22690.2); Has 833
Blast hits to 829 proteins in 195 species: Archae - 0;
Bacteria - 0; Metazoa - 364; Fungi - 234; Plants - 138;
Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink)."
/db_xref="TAIR:AT4G37880"
/db_xref="Araport:AT4G37880"
BEGIN
1 MELKSIKDAF DRVATKQKLS YSKTNEIVHM LSQEIDKALS ILEETPSSDT MLLDHRSILA
61 DVKKVFMEIA PITQLEATEK ELHAALTKYP KVLEKQLNPD ISKAYRHNVE FDTHIVNQII
121 ANFFYRQGMF DIGDCFVAET GESECSTRQS FVEMYRILEA MKRRDLEPAL NWAVSNSDKL
181 KEARSDLEMK LHSLHFLEIA RGKNSKEAID YARKHIATFA DSCLPEIQKL MCSLLWNRKL
241 DKSPYSEFLS PALWNNAVKE LTRQYCNLLG ESSESPLSIT VTAGTQALPV LLKYMNVVMA
301 NKKLDWQTME QLPVDAQLSE EFQFHSVFVC PVSKEQSSDD NPPMMMSCGH VLCKQTINKM
361 SKNGSKSSFK CPYCPTDVDI SRCRQLHF
//