LOCUS AEE86835.1 525 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana squalene epoxidase 3 protein.
ACCESSION CP002687-6991
PROTEIN_ID AEE86835.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="SQE3"
/locus_tag="AT4G37760"
/gene_synonym="squalene epoxidase 3"
/gene_synonym="T28I19.40"
/gene_synonym="T28I19_40"
/inference="Similar to RNA sequence,
EST:INSD:EL245484.1,INSD:BP636826.1,INSD:AV803889.1,
INSD:BP816606.1,INSD:BP603937.1,INSD:BP778339.1,
INSD:AV526659.1,INSD:BP616417.1,INSD:EL170713.1,
INSD:EL335295.1,INSD:DR292214.1,INSD:EH832482.1,
INSD:BP783669.1,INSD:EL242984.1,INSD:EL176935.1,
INSD:DR380549.1,INSD:DR292221.1,INSD:AV439511.1,
INSD:EL067978.1,INSD:EL093184.1,INSD:EL282002.1,
INSD:DR380092.1,INSD:DR292215.1,INSD:EL275901.1,
INSD:EL166927.1,INSD:DR292217.1,INSD:AV818480.1,
INSD:AV551812.1,INSD:AV805919.1,INSD:DR292219.1,
INSD:BP817384.1,INSD:AV787903.1,INSD:EH849431.1,
INSD:DR292213.1,INSD:EL174761.1,INSD:AV539805.1,
INSD:DR292220.1,INSD:AV441653.1,INSD:BP839533.1,
INSD:BP658209.1,INSD:EL111618.1,INSD:EH906429.1,
INSD:EL127085.1,INSD:BP828160.1,INSD:EH959410.1,
INSD:AV801163.1,INSD:EL016023.1,INSD:EL260301.1,
INSD:AV815876.1,INSD:DR292216.1,INSD:AV794911.1,
INSD:BP782973.1,INSD:EH852898.1,INSD:EL022393.1,
INSD:EL078910.1,INSD:BP827148.1,INSD:ES147373.1,
INSD:BP818660.1,INSD:EL171704.1,INSD:EL279148.1,
INSD:EL133656.1,INSD:EL016889.1,INSD:AV814304.1,
INSD:EL979867.1,INSD:EH967393.1,INSD:EH922229.1,
INSD:EH965306.1,INSD:EH926978.1,INSD:EH867689.1,
INSD:EL035365.1,INSD:EL144913.1,INSD:EL284820.1,
INSD:BP817397.1,INSD:EH962306.1,INSD:AV440156.1,
INSD:EH957387.1,INSD:CB185918.1,INSD:EL228018.1,
INSD:EH951311.1,INSD:BP823701.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY084818.1,INSD:AY072019.1,INSD:AK226847.1,
INSD:BX827194.1,INSD:BT001057.1"
/note="squalene epoxidase 3 (SQE3); FUNCTIONS IN: squalene
monooxygenase activity; INVOLVED IN: response to jasmonic
acid stimulus, response to wounding, sterol biosynthetic
process; LOCATED IN: endomembrane system, integral to
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Squalene epoxidase (InterPro:IPR013698), Fumarate
reductase/succinate dehydrogenase flavoprotein, N-terminal
(InterPro:IPR003953); BEST Arabidopsis thaliana protein
match is: squalene epoxidase 2 (TAIR:AT2G22830.1); Has
30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="TAIR:AT4G37760"
/db_xref="Araport:AT4G37760"
intron_pos 76:0 (1/5)
intron_pos 113:1 (2/5)
intron_pos 171:2 (3/5)
intron_pos 228:0 (4/5)
intron_pos 486:0 (5/5)
BEGIN
1 MAPTIFVDHC ILTTTFVASL FAFLLLYVLR RRSKTIHGSV NVRNGTLTVK SGTDVDIIIV
61 GAGVAGAALA HTLGKEGRRV HVIERDLTEP DRIVGELLQP GGYLKLIELG LEDCVKDIDA
121 QRVLGYALFK DGKHTKLSYP LDQFDSDVAG RSFHNGRFVQ RMREKASLLP NVRMEQGTVT
181 SLVEENGIIK GVQYKTKDGQ ELKSFAPLTI VCDGCFSNLR RSLCKPKVEV PSNFVGLVLE
241 NCELPFPNHG HVVLGDPSPI LFYPISSSEV RCLVDVPGSK LPSVASGEMA HHLKTMVAPQ
301 VPPQIRDAFI SAVEKGNIRT MPNRSMPADP IHTPGALLLG DAFNMRHPLT GGGMTVALSD
361 IVILRDLLNP LVDLTNKESL SKYIESFYTL RKPVASTINT LAGALYKVFL ASPDDARSEM
421 RRACFDYLSL GGVCSSGPVA LLSGLNPRPM SLVLHFFAVA IFGVGRLLVP LPSVKRLWLG
481 ARLISSASGI IFPIIKAEGV RQMFFPRTIP AIYRAPPTPS SSSPQ
//