LOCUS AEE86808.1 240 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana LOB domain-containing protein 39 protein.
ACCESSION CP002687-6953
PROTEIN_ID AEE86808.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="LBD39"
/locus_tag="AT4G37540"
/gene_synonym="F19F18.30"
/gene_synonym="F19F18_30"
/gene_synonym="LOB domain-containing protein 39"
/inference="Similar to RNA sequence,
EST:INSD:DR338700.1,INSD:EL188910.1,INSD:BP668683.1,
INSD:BP574601.1,INSD:EG506767.1,INSD:EG525357.1,
INSD:R65200.1,INSD:EG506174.1,INSD:EL124854.1,
INSD:DR338699.1,INSD:DR338701.1,INSD:EL095270.1,
INSD:ES043700.1,INSD:EL148063.1,INSD:AV817284.1,
INSD:ES082372.1,INSD:EG506765.1,INSD:EL143377.1,
INSD:BP631223.1,INSD:ES214811.1,INSD:EL287641.1,
INSD:EG525355.1,INSD:DR375202.1,INSD:BP853620.1,
INSD:BP615109.1,INSD:EG517709.1,INSD:DR338698.1,
INSD:ES157908.1,INSD:AI994989.1,INSD:EG506172.1,
INSD:BP630381.1,INSD:BP563519.1,INSD:EL133949.1,
INSD:EL995566.1,INSD:ES105210.1,INSD:BP667354.1,
INSD:EL095507.1,INSD:AV831648.1,INSD:EH913221.1,
INSD:ES125935.1,INSD:EG517710.1,INSD:BP670160.1,
INSD:AV552189.1,INSD:EH818918.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY122976.1,INSD:AY087291.1,INSD:AY072144.1,
INSD:AB473874.1"
/note="LOB domain-containing protein 39 (LBD39); CONTAINS
InterPro DOMAIN/s: Lateral organ boundaries, LOB
(InterPro:IPR004883); BEST Arabidopsis thaliana protein
match is: LOB domain-containing protein 38
(TAIR:AT3G49940.1); Has 571 Blast hits to 570 proteins in
25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 571; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="TAIR:AT4G37540"
/db_xref="Araport:AT4G37540"
intron_pos 62:1 (1/1)
BEGIN
1 MSCNGCRVLR KGCSETCILR PCLQWIESAE SQGHATVFVA KFFGRAGLMS FISSVPELQR
61 PALFQSLLFE ACGRTVNPVN GAVGMLWTRN WHVCQAAVET VLRGGTLRPI SDLLESPSLM
121 ISCDESSEIW HQDVSRNQTH HCRFSTSRST TEMKDSLVNR KRLKSDSDLD LQVNHGLTLT
181 APAVPVPFLP PSSFCKVVKG DRPGSPSEES VTTSCWENGM RGDNKQKRNK GEKKLLNLFV
//