LOCUS AEE86803.1 537 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribonuclease III family protein protein.
ACCESSION CP002687-6948
PROTEIN_ID AEE86803.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G37510"
/gene_synonym="F6G17.160"
/gene_synonym="F6G17_160"
/inference="Similar to RNA sequence,
EST:INSD:EG513778.1,INSD:EL981227.1,INSD:ES195411.1,
INSD:ES210927.1,INSD:ES210891.1,INSD:EG486119.1,
INSD:EL071230.1,INSD:DR380772.1,INSD:EG513771.1,
INSD:EL274238.1,INSD:ES105112.1,INSD:EH836430.1,
INSD:EL222817.1,INSD:EG513788.1,INSD:EG514378.1,
INSD:EG486097.1,INSD:AV526815.1,INSD:BX839271.1,
INSD:AV521338.1,INSD:EL197129.1,INSD:EL201568.1,
INSD:AV527411.1,INSD:AI999427.1,INSD:EG514322.1,
INSD:BX839252.1,INSD:BX835530.1,INSD:EL018905.1,
INSD:DR295513.1,INSD:AV809799.1,INSD:EG486108.1,
INSD:EG513817.1,INSD:EG486086.1,INSD:EH977931.1,
INSD:EL136586.1,INSD:EL291277.1,INSD:EL333594.1,
INSD:EG513780.1,INSD:DR282776.1,INSD:DR380290.1,
INSD:EG513895.1,INSD:EG514296.1,INSD:EL113281.1,
INSD:AV807766.1,INSD:AV520487.1,INSD:EH883256.1,
INSD:EL186042.1,INSD:BX835714.1,INSD:EL187033.1,
INSD:DR282778.1,INSD:ES022549.1,INSD:AV520908.1,
INSD:EL208755.1,INSD:DR295512.1,INSD:BP591022.1,
INSD:EG514276.1,INSD:DR282775.1,INSD:EL337908.1,
INSD:AV557670.1,INSD:BP809438.1,INSD:BP665371.1,
INSD:EG514087.1,INSD:EL262652.1,INSD:EH815044.1,
INSD:BP629179.1,INSD:EL112984.1,INSD:EL222595.1,
INSD:BP666051.1,INSD:EL214089.1,INSD:EL160098.1,
INSD:EL120650.1,INSD:AV520895.1,INSD:EG513800.1,
INSD:DR282777.1,INSD:ES091975.1,INSD:BX835519.1,
INSD:AV791508.1,INSD:ES022579.1,INSD:EH864637.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX829005.1,INSD:BX827537.1,INSD:BT025333.1,
INSD:BX826857.1,INSD:AK226546.1,INSD:BX827716.1"
/note="Ribonuclease III family protein; FUNCTIONS IN: RNA
binding, ribonuclease III activity; INVOLVED IN: RNA
processing; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Ribonuclease III
(InterPro:IPR000999); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G48121.2); Has 794
Blast hits to 789 proteins in 319 species: Archae - 0;
Bacteria - 574; Metazoa - 0; Fungi - 39; Plants - 42;
Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink)."
/db_xref="TAIR:AT4G37510"
/db_xref="Araport:AT4G37510"
intron_pos 268:2 (1/4)
intron_pos 337:0 (2/4)
intron_pos 404:0 (3/4)
intron_pos 433:0 (4/4)
BEGIN
1 MELCSSSPSS SLLRICSSSA PEISFSSSIS QFPSKTQSIL TKSRFQNLRI CASVTAETQG
61 LPRDSPQRLL KELAQRKTAT GPKKKVPPKR FILRPPLDDK KLAERFLNSP QLSLKSFPLL
121 SSCLPSSKLN NADKTWIDEY LLEVKQALGY SLEPSESLGD DNPAKHFDTL LYLAFQHPSC
181 DRARARHVKN GHSRLWFLGQ YVLELALTEF FLQRYPRESP GPMRERVFAL IGKRYLPKWI
241 KAASLQNLIF PYDDMDKLIR KEREPPVKSV FWALFGAIYL CFGMPEVYRV LFEVFGMDPD
301 ADECQPRSRR QLEDVDYVSV EFEGKKLGWQ DIATYKPPED ALFAHPRLFR ACVPPGMHRF
361 RGNIWDFDSK PKVMQTLGYP LTMNDRIKEI TEARNIELGL GLQLCFLHPS KHKFEHPRFC
421 FERLEYVGQK IQDIAMAERL LMKHLDAPGK WLQEKHRRLL MNKFCGRYLR EKRLHNFIIY
481 SEEVHDRYEH NRRLRNPATT AVQQAIHGLA YTIYGKPDVR RLMFEVFDFE QIQPKAV
//