LOCUS AEE86768.1 492 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002687-6904
PROTEIN_ID AEE86768.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G37210"
/gene_synonym="AP22.13"
/gene_synonym="AP22_13"
/inference="Similar to RNA sequence,
EST:INSD:ES095269.1,INSD:ES164576.1,INSD:BP596562.1,
INSD:EH905457.1,INSD:EL993448.1,INSD:ES027159.1,
INSD:DR261232.1,INSD:EL011878.1,INSD:ES056358.1,
INSD:EL048459.1,INSD:EG457620.1,INSD:ES112794.1,
INSD:DR379595.1,INSD:ES075155.1,INSD:ES211925.1,
INSD:ES005897.1,INSD:DR261233.1,INSD:ES191861.1,
INSD:BP620195.1,INSD:ES107389.1,INSD:EL104462.1,
INSD:BP576559.1,INSD:EL160317.1,INSD:EG490553.1,
INSD:EL075219.1,INSD:AV822605.1,INSD:BP581302.1,
INSD:EG490557.1,INSD:BX837757.1,INSD:EG490556.1,
INSD:ES087241.1,INSD:ES170672.1,INSD:EH867392.1,
INSD:ES021107.1,INSD:CK118114.1,INSD:EG490554.1,
INSD:EG457618.1,INSD:EL981827.1,INSD:ES200317.1,
INSD:ES048294.1,INSD:AV783410.1,INSD:BP793868.1,
INSD:EH979969.1,INSD:AV799881.1,INSD:BP574009.1,
INSD:BP568974.1,INSD:AV561469.1,INSD:ES142151.1,
INSD:ES141395.1,INSD:BP579544.1,INSD:BP576484.1,
INSD:ES024954.1,INSD:EL254332.1,INSD:EL316296.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY062946.1,INSD:BX827408.1,INSD:BX828306.1,
INSD:BX826406.1,INSD:BX827266.1,INSD:AF370189.1,
INSD:BX827189.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Tetratricopeptide TPR-1 (InterPro:IPR001440),
Tetratricopeptide-like helical (InterPro:IPR011990),
Tetratricopeptide repeat-containing (InterPro:IPR013026),
Tetratricopeptide repeat (InterPro:IPR019734); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G37210"
/db_xref="Araport:AT4G37210"
intron_pos 110:2 (1/5)
intron_pos 183:1 (2/5)
intron_pos 254:1 (3/5)
intron_pos 284:2 (4/5)
intron_pos 376:0 (5/5)
BEGIN
1 MVEESASASE ASVIQTLTEP ATEIAQTLEP NLASIEATVE SVVQGGTEST CNNDANNNNA
61 ADSAATEVCD EEREKTLEFA EELTEKGSVF LKENDFAEAV DCFSRALEIR VAHYGELDAE
121 CINAYYRYGL ALLAKAQAEA DPLGNMPKKE GEVQQESSNG ESLAPSVVSG DPERQGSSSG
181 QEGSGGKDQG EDGEDCQDDD LSDADGDADE DESDLDMAWK MLDIARVITD KQSTETMEKV
241 DILCSLAEVS LEREDIESSL SDYKNALSIL ERLVEPDSRR TAELNFRICI CLETGCQPKE
301 AIPYCQKALL ICKARMERLS NEIKGASGSA TSSTVSEIDE GIQQSSNVPY IDKSASDKEV
361 EIGDLAGLAE DLEKKLEDLK QQAENPKQVL AELMGMVSAK PNASDKVVPA AAEMSSSRMG
421 TVNTNFGKDL ESPTVSTAHT GAAGGGAASG VTHLGVVGRG VKRVLMNTTS IESSASKKPA
481 LEFSDKADGN SS
//