LOCUS AEE86703.1 184 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RUB1 conjugating enzyme 1 protein.
ACCESSION CP002687-6824
PROTEIN_ID AEE86703.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="RCE1"
/locus_tag="AT4G36800"
/gene_synonym="AP22.40"
/gene_synonym="AP22_40"
/gene_synonym="RUB1 conjugating enzyme 1"
/inference="Similar to RNA sequence,
EST:INSD:AV563292.1,INSD:T41550.1,INSD:EH886382.1,
INSD:BP648807.1,INSD:AV542960.1,INSD:EL117192.1,
INSD:DR374620.1,INSD:EL246363.1,INSD:DR372665.1,
INSD:CD529123.1,INSD:BP841234.2,INSD:EL142509.1,
INSD:DR274040.1,INSD:EL970884.1,INSD:EH946073.1,
INSD:BP584720.1,INSD:DR274036.1,INSD:AV790615.1,
INSD:EH932237.1,INSD:AV565404.1,INSD:BP804536.1,
INSD:BP847965.2,INSD:BP797626.1,INSD:EL977514.1,
INSD:EG511807.1,INSD:DR327396.1,INSD:EL307910.1,
INSD:AV557821.1,INSD:CB263311.1,INSD:EL088420.1,
INSD:BP811848.1,INSD:DR274038.1,INSD:BP833507.1,
INSD:EL182159.1,INSD:EH845230.1,INSD:ES185657.1,
INSD:EL993536.1,INSD:EH884957.1,INSD:EL328753.1,
INSD:BP625932.1,INSD:ES189540.1,INSD:ES136226.1,
INSD:EH835645.1,INSD:DR274035.1,INSD:EL294221.1,
INSD:BE520821.1,INSD:BP864938.1,INSD:EL047459.1,
INSD:BP583360.1,INSD:EH798811.1,INSD:BE520820.1,
INSD:EH822012.1,INSD:BP656573.1,INSD:BP831987.1,
INSD:EL233340.1,INSD:EH875449.1,INSD:T04722.1,
INSD:BP589975.1,INSD:EL971024.1,INSD:DR274039.1,
INSD:ES161152.1,INSD:EL296868.1,INSD:EL133506.1,
INSD:EH867188.1,INSD:DR232266.1,INSD:ES038486.1,
INSD:BP822345.1,INSD:EH965359.1,INSD:EL303490.1,
INSD:AV823048.1,INSD:EL154174.1,INSD:EL128303.1,
INSD:EL983963.1,INSD:BP640109.1,INSD:BP867636.1,
INSD:BP619621.1,INSD:EL210710.1,INSD:EH930815.1,
INSD:BP648198.1,INSD:AV783946.1,INSD:ES185347.1,
INSD:ES070207.1,INSD:BP796355.1,INSD:EG492183.1,
INSD:EL331998.1,INSD:DR274037.1,INSD:ES202218.1,
INSD:EL210591.1,INSD:EH964298.1,INSD:EH855228.1,
INSD:AV565559.1,INSD:EL108694.1,INSD:BP657554.1,
INSD:DR232265.1,INSD:ES186986.1,INSD:EH963575.1,
INSD:EL179943.1,INSD:EL012651.1,INSD:EH901209.1,
INSD:BP837690.1,INSD:AV564028.1,INSD:ES167776.1,
INSD:ES193123.1,INSD:EH839343.1,INSD:BP834241.2,
INSD:ES002170.1,INSD:EL306614.1,INSD:BP671446.1,
INSD:EL287397.1,INSD:CD568296.1,INSD:EH846680.1,
INSD:EL024977.1,INSD:EL999259.1,INSD:CF653019.1,
INSD:BP815962.1,INSD:EH930184.1,INSD:ES181114.1,
INSD:EH811880.1,INSD:BP669143.1,INSD:BP822940.1,
INSD:EH892977.1,INSD:EL970506.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY097381.1,INSD:AY048210.1,INSD:AF202771.1,
INSD:BX827674.1"
/note="RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro
DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like
(InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2
(InterPro:IPR000608), RUB1 conjugating enzyme Ubc12
(InterPro:IPR015580); BEST Arabidopsis thaliana protein
match is: Ubiquitin-conjugating enzyme family protein
(TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins
in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871;
Fungi - 1731; Plants - 1533; Viruses - 20; Other
Eukaryotes - 1318 (source: NCBI BLink)."
/db_xref="TAIR:AT4G36800"
/db_xref="Araport:AT4G36800"
intron_pos 38:1 (1/4)
intron_pos 74:2 (2/4)
intron_pos 101:0 (3/4)
intron_pos 140:0 (4/4)
BEGIN
1 MIGLFKVKEK QREQAQNATR GGASVKKQSA GELRLHKDIS ELNLPSSCSI SFPNGKDDLM
61 NFEVSIKPDD GYYHNGTFVF TFQVSPVYPH EAPKVKCKTK VYHPNIDLEG NVCLNILRED
121 WKPVLNINTV IYGLFHLFTE PNSEDPLNHD AAAVLRDNPK LFETNVRRAM TGGYVGQTFF
181 PRCI
//