LOCUS AEE86683.1 369 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana plant-specific TFIIB-related protein protein.
ACCESSION CP002687-6800
PROTEIN_ID AEE86683.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PBRP"
/locus_tag="AT4G36650"
/gene_synonym="AP22.23"
/gene_synonym="AP22_23"
/gene_synonym="ATPBRP"
/gene_synonym="plant-specific TFIIB-related protein"
/inference="Similar to RNA sequence,
EST:INSD:ES038611.1,INSD:BP562783.2,INSD:EH917003.1,
INSD:ES126230.1,INSD:ES113151.1,INSD:ES215680.1,
INSD:AV553507.1,INSD:AV543749.1,INSD:AV822539.1,
INSD:AV552147.1,INSD:AV558389.1,INSD:EL323518.1,
INSD:EH795384.1,INSD:ES115790.1,INSD:ES122850.1,
INSD:EL099120.1,INSD:EL992207.1,INSD:ES110480.1,
INSD:AV783331.1,INSD:EL157793.1,INSD:ES074162.1,
INSD:ES107253.1,INSD:EL169211.1,INSD:ES046939.1,
INSD:EH883464.1,INSD:ES136450.1,INSD:EL979258.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX827950.1"
/note="plant-specific TFIIB-related protein (PBRP);
FUNCTIONS IN: RNA polymerase II transcription factor
activity, rDNA binding; INVOLVED IN: translational
initiation, regulation of transcription, DNA-dependent,
transcription initiation; LOCATED IN: plastid outer
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Transcription factor TFIIB related (InterPro:IPR000812),
Transcription factor TFIIB, cyclin-related
(InterPro:IPR013150), Cyclin-like (InterPro:IPR011028),
Cyclin-related (InterPro:IPR013763), Cyclin
(InterPro:IPR006670); BEST Arabidopsis thaliana protein
match is: transcription factor IIB (TAIR:AT2G41630.1); Has
1297 Blast hits to 1296 proteins in 319 species: Archae -
504; Bacteria - 1; Metazoa - 214; Fungi - 180; Plants -
140; Viruses - 3; Other Eukaryotes - 255 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G36650"
/db_xref="Araport:AT4G36650"
intron_pos 195:0 (1/3)
intron_pos 248:0 (2/3)
intron_pos 301:0 (3/3)
BEGIN
1 MKCPYCSSAQ GRCTTTSSGR SITECSSCGR VMEERQTQNH HLFHLRAQDT PLCLVTSDLQ
61 TAAQPSPEDE EDPFEPTGFI TAFSTWSLEP SPIFARSSLS FSGHLAELER TLELASSTSN
121 SNSSTVVVDN LRAYMQIIDV ASILGLDCDI SEHAFQLFRD CCSATCLRNR SVEALATACL
181 VQAIREAQEP RTLQEISIAA NVQQKEIGKY IKILGEALQL SQPINSNSIS VHMPRFCTLL
241 QLNKSAQELA THIGEVVINK CFCTRRNPIS ISAAAIYLAC QLEDKRKTQA EICKITGLTE
301 RKHFPQPQSP QPAQQLLEPW IHLNLVSWKK TSPLRNQSKL SIIPTNNRKA KKISSQNSDS
361 LGCLELPVS
//