LOCUS AEE86652.1 559 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana FAD-linked oxidases family protein protein.
ACCESSION CP002687-6765
PROTEIN_ID AEE86652.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="D2HGDH"
/locus_tag="AT4G36400"
/gene_synonym="AP22.14"
/gene_synonym="AP22_14"
/gene_synonym="D-2-hydroxyglutarate dehydrogenase"
/inference="Similar to RNA sequence,
EST:INSD:AA042437.1,INSD:EL269605.1,INSD:EL048700.1,
INSD:AV802333.1,INSD:BP668260.1,INSD:EL181266.1,
INSD:AV787677.1,INSD:ES071775.1,INSD:EL039289.1,
INSD:EL305700.1,INSD:DR381793.1,INSD:ES019207.1,
INSD:ES022676.1,INSD:CD531789.1,INSD:EH832074.1,
INSD:EL204528.1,INSD:DR293642.1,INSD:BP849031.1,
INSD:ES011339.1,INSD:ES047564.1,INSD:BP663205.1,
INSD:EH847874.1,INSD:EH952421.1,INSD:AV802198.1,
INSD:EH899588.1,INSD:EL006274.1,INSD:ES091485.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY090301.1"
/note="FAD-linked oxidases family protein; FUNCTIONS IN:
electron carrier activity, (R)-2-hydroxyglutarate
dehydrogenase activity; INVOLVED IN: biological_process
unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: FAD-binding, type 2
(InterPro:IPR016166), FAD-linked oxidase, C-terminal
(InterPro:IPR004113), FAD-linked oxidase-like, C-terminal
(InterPro:IPR016164), FAD linked oxidase, N-terminal
(InterPro:IPR006094), FAD-binding, type 2, subdomain 1
(InterPro:IPR016167); BEST Arabidopsis thaliana protein
match is: FAD-linked oxidases family protein
(TAIR:AT5G06580.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT4G36400"
/db_xref="Araport:AT4G36400"
intron_pos 36:1 (1/14)
intron_pos 146:0 (2/14)
intron_pos 180:0 (3/14)
intron_pos 196:0 (4/14)
intron_pos 219:2 (5/14)
intron_pos 259:1 (6/14)
intron_pos 291:1 (7/14)
intron_pos 328:0 (8/14)
intron_pos 355:0 (9/14)
intron_pos 387:2 (10/14)
intron_pos 424:0 (11/14)
intron_pos 459:1 (12/14)
intron_pos 488:0 (13/14)
intron_pos 530:0 (14/14)
BEGIN
1 MMMQKLRRSG EFIRFGCKSL ISSRPNKDSV SRSVSGFVNH YKSKGKLFEL SDGNYKTELH
61 HPCISRNVGM LLQQYKCFGS SAASLIQRNP LFSSLDSKDV SYFKEILGEK NVVEDKERLE
121 TANTDWMHKY KGSSKLMLLP KNTQEVSQIL EYCDSRRLAV VPQGGNTGLV GGSVPVFDEV
181 IVNVGLMNKI LSFDEVSGVL VCEAGCILEN LATFLDTKGF IMPLDLGAKG SCHIGGNVST
241 NAGGLRLIRY GSLHGTVLGL EAVTANGNVL DMLGTLRKDN TGYDLKHLFI GSEGSLGIVT
301 KVSILTQPKL SSVNLAFIAC KDYLSCQKLL VEAKRNLGEI LSAFEFLDNN SMDLVLNHLD
361 GVRNPVSSSE NFYILIETTG SDETNDREKL EAFLLKSLEK GLVSDGVIAQ DINQASSFWR
421 IREGITEALQ KAGAVYKYDL SLPVEEIYNI VNDLRGRLGD LANVMGYGHL GDGNLHLNIS
481 AAEYNDKLLG LIEPYVYEWT SKHRGSISAE HGLGVMKANE IFYSKSPETV ALMASIKKLL
541 DPKGILNPYK VLPHSLFSN
//