LOCUS AEE86580.1 444 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002687-6662
PROTEIN_ID AEE86580.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G35850"
/gene_synonym="F4B14.120"
/gene_synonym="F4B14_120"
/inference="Similar to RNA sequence,
EST:INSD:CF652425.1,INSD:ES048661.1,INSD:ES177971.1,
INSD:BP578346.1,INSD:Z34700.1,INSD:EG495308.1,
INSD:EL166623.1,INSD:EH914230.1,INSD:DR299982.1,
INSD:EL214225.1,INSD:ES059339.1,INSD:ES014277.1,
INSD:EH830394.1,INSD:BP641339.1,INSD:F13967.1,
INSD:AV815557.1,INSD:BP835610.1,INSD:EH925257.1,
INSD:BP787474.1,INSD:ES079894.1,INSD:AV549846.1,
INSD:EH853431.1,INSD:AV531391.1,INSD:ES117246.1,
INSD:AV809030.1,INSD:BP793545.1,INSD:EH885561.1,
INSD:EL257914.1,INSD:ES211098.1,INSD:DR372765.1,
INSD:AV803705.1,INSD:AV787114.1,INSD:BP842796.1,
INSD:AV536564.1,INSD:EH862474.1,INSD:BE526555.1,
INSD:CK121230.1,INSD:DR299984.1,INSD:F14103.1,
INSD:EG495309.1,INSD:EH797669.1,INSD:CD532545.1,
INSD:ES164964.1,INSD:BP655036.1,INSD:AV805975.1,
INSD:DR299985.1,INSD:AV556569.1,INSD:ES168824.1,
INSD:Z33709.1,INSD:AV567556.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX827342.1,INSD:AY088310.1,INSD:BX827488.1,
INSD:AY070070.1,INSD:AY091334.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT2G02150.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G35850"
/db_xref="Araport:AT4G35850"
intron_pos 10:1 (1/12)
intron_pos 56:2 (2/12)
intron_pos 111:0 (3/12)
intron_pos 133:0 (4/12)
intron_pos 165:2 (5/12)
intron_pos 205:0 (6/12)
intron_pos 274:0 (7/12)
intron_pos 299:2 (8/12)
intron_pos 331:0 (9/12)
intron_pos 353:0 (10/12)
intron_pos 379:0 (11/12)
intron_pos 413:0 (12/12)
BEGIN
1 MKFLMQSISG RNRSLVRALV SRRYFASSPE EIAKRNYAND LSEYNTAVNS VTAQRRHYLL
61 RDVYDDMKLD GVQPTADIFH SFVVGTMKGA RLSDAFFFRE EMKAMGIAPD VNLYNFLIST
121 CGKCKNGKEA IRVYDEMKRY DVKPNGQTFV CLLNACAVSG QLDLVYAIVR DMTAAGVGLN
181 QFCYAGLITA HLNKQPRPDN LSTKILEFVE QSKGWSAIDS SRKSAEDVMF SISEEELYNI
241 PTADYSHRTR FLQRNLTVYH VAFSALADLK DVKATEALLE MLKKDGKDTD TYCMLQIMRC
301 YLHSQDFENG LKLFQDYMSA DKIPAMELYT TLIEGAMTGY TDNGMKIAQD TLIQMNERNF
361 FLDPRTGSNL LLKAAGEKTG GYTVANMIWD LMLARNILPT LAAVEAYYKG LKEREIPEDD
421 PRLMLVTRTY NNLRLREGTL PNRR
//