LOCUS AEE86572.1 868 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana phospholipase D delta protein.
ACCESSION CP002687-6651
PROTEIN_ID AEE86572.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PLDDELTA"
/locus_tag="AT4G35790"
/gene_synonym="ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA"
/gene_synonym="ATPLDDELTA"
/gene_synonym="F4B14.60"
/gene_synonym="F4B14_60"
/gene_synonym="PHOSPHOLIPASE D"
/gene_synonym="phospholipase D delta"
/inference="Similar to RNA sequence,
EST:INSD:DR358888.1,INSD:BP818415.1,INSD:EL290574.1,
INSD:EG502921.1,INSD:BP578827.1,INSD:AV523982.1,
INSD:EH816436.1,INSD:BP611260.1,INSD:BP578912.1,
INSD:AV821046.1,INSD:EL109869.1,INSD:BP577537.1,
INSD:EL018768.1,INSD:BP574166.1,INSD:BP571590.1,
INSD:BP813395.1,INSD:AV803857.1,INSD:AV812664.1,
INSD:AV528921.1,INSD:AV530191.1,INSD:AV796517.1,
INSD:EL226343.1,INSD:AV523529.1,INSD:AV524312.1,
INSD:N65741.1,INSD:W43871.1,INSD:DR358891.1,
INSD:BP620014.1,INSD:BP778925.1,INSD:BP617540.1,
INSD:AV523199.1,INSD:BP588509.1,INSD:BP596442.1,
INSD:AV794698.1,INSD:W43825.1,INSD:BP566754.1,
INSD:AV817969.1,INSD:BP571504.1,INSD:BP580806.1,
INSD:BP810454.1,INSD:AV541429.1,INSD:AV820190.1,
INSD:AV796459.1,INSD:EG467254.1,INSD:BP583149.1,
INSD:AI993659.1,INSD:DR350430.1,INSD:BP862372.1,
INSD:EG467255.1,INSD:AV541436.1,INSD:DR358890.1,
INSD:BP567833.1,INSD:AV831838.1,INSD:AV815935.1,
INSD:EH884023.1,INSD:BP566939.1,INSD:AV563252.1,
INSD:BP822635.1,INSD:EH962130.1,INSD:BP799864.1,
INSD:AV820442.1,INSD:EL132610.1,INSD:BP584546.1,
INSD:EH833471.1,INSD:BP798870.1,INSD:BP564173.1,
INSD:BP581492.1,INSD:BP581677.1,INSD:N96688.1,
INSD:BP599363.1,INSD:BP576162.1,INSD:DR350431.1,
INSD:AV820574.1,INSD:ES062593.1,INSD:AV815379.1,
INSD:BP622099.1,INSD:BP573241.1,INSD:EL240968.1,
INSD:BP644497.1,INSD:AV546717.1,INSD:EH839301.1,
INSD:EL085572.1,INSD:DR358889.1,INSD:BP800530.1,
INSD:AV810448.1,INSD:ES204827.1,INSD:AV524302.1,
INSD:BP580781.1,INSD:AV811192.1,INSD:N96112.1,
INSD:AA651235.1,INSD:AV563251.1,INSD:CF652514.1,
INSD:BP583325.1,INSD:BP582021.1,INSD:EG477498.1,
INSD:BP802868.1,INSD:BP600737.1,INSD:BP574562.1,
INSD:BP618541.1,INSD:BE526043.1,INSD:EL025503.1,
INSD:EL193090.1,INSD:BE525672.1,INSD:BP577295.1,
INSD:BP618720.1,INSD:BP780452.1,INSD:EL092800.1,
INSD:BP618091.1,INSD:BP821832.1,INSD:DR358892.1,
INSD:ES182781.1,INSD:BP570858.1,INSD:W43543.1,
INSD:EH989874.1,INSD:BP601581.1,INSD:ES092443.1,
INSD:EL041781.1,INSD:EL990033.1,INSD:EL250708.1,
INSD:ES117444.1,INSD:BP803341.1,INSD:ES019492.1,
INSD:AV529219.1,INSD:BP809701.1,INSD:AV523692.1,
INSD:BP799796.1,INSD:BP562494.2,INSD:EL021570.1,
INSD:AV529434.1,INSD:BP810643.1,INSD:EL113321.1,
INSD:AV820058.1,INSD:BP804543.1,INSD:BP564590.1,
INSD:EL022795.1,INSD:BP583890.1,INSD:BP615872.1,
INSD:EL260028.1,INSD:ES063542.1"
/inference="Similar to RNA sequence, mRNA:INSD:AB031047.1"
/note="phospholipase D delta (PLDDELTA); FUNCTIONS IN:
phospholipase D activity; INVOLVED IN: response to water
deprivation, response to cold, hyperosmotic salinity
response, phosphatidic acid metabolic process, programmed
cell death; LOCATED IN: microtubule cytoskeleton, plasma
membrane, vacuole, membrane; EXPRESSED IN: 31 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: C2 membrane targeting protein
(InterPro:IPR018029), C2 calcium/lipid-binding domain,
CaLB (InterPro:IPR008973), Phospholipase D
(InterPro:IPR015679), Phospholipase D, plant
(InterPro:IPR011402), Phospholipase D/Transphosphatidylase
(InterPro:IPR001736), C2 calcium-dependent membrane
targeting (InterPro:IPR000008); BEST Arabidopsis thaliana
protein match is: phospholipase D beta 1
(TAIR:AT2G42010.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G35790"
/db_xref="Araport:AT4G35790"
intron_pos 315:0 (1/9)
intron_pos 365:0 (2/9)
intron_pos 430:0 (3/9)
intron_pos 532:0 (4/9)
intron_pos 555:0 (5/9)
intron_pos 604:1 (6/9)
intron_pos 654:0 (7/9)
intron_pos 704:0 (8/9)
intron_pos 771:0 (9/9)
BEGIN
1 MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK
61 GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ EPLWDEKFNI SIAHPFAYLE
121 FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD
181 QIHSYRCGIA GDPERRGVRR TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC
241 WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301 WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQASPSSSI
361 YIMTVVGTLF THHQKCVLVD TQAVGNNRKV TAFIGGLDLC DGRYDTPEHR ILHDLDTVFK
421 DDFHNPTFPA GTKAPRQPWH DLHCRIDGPA AYDVLINFEQ RWRKATRWKE FSLRLKGKTH
481 WQDDALIRIG RISWILSPVF KFLKDGTSII PEDDPCVWVS KEDDPENWHV QIFRSIDSGS
541 VKGFPKYEDE AEAQHLECAK RLVVDKSIQT AYIQTIRSAQ HFIYIENQYF LGSSYAWPSY
601 RDAGADNLIP MELALKIVSK IRAKERFAVY VVIPLWPEGD PKSGPVQEIL YWQSQTMQMM
661 YDVIAKELKA VQSDAHPLDY LNFYCLGKRE QLPDDMPATN GSVVSDSYNF QRFMIYVHAK
721 GMIVDDEYVL MGSANINQRS MAGTKDTEIA MGAYQPNHTW AHKGRHPRGQ VYGYRMSLWA
781 EHLGKTGDEF VEPSDLECLK KVNTISEENW KRFIDPKFSE LQGHLIKYPL QVDVDGKVSP
841 LPDYETFPDV GGKIIGAHSM ALPDTLTT
//