LOCUS AEE86567.1 207 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA-binding (RRM/RBD/RNP motifs)
family protein protein.
ACCESSION CP002687-6649
PROTEIN_ID AEE86567.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G35785"
/inference="Similar to RNA sequence,
EST:INSD:AV551385.1,INSD:BP792845.1,INSD:ES005799.1,
INSD:EH857405.1,INSD:EL125101.1,INSD:BP632183.1,
INSD:DR269014.1,INSD:EH850297.1,INSD:ES113334.1,
INSD:EL249219.1,INSD:ES076801.1,INSD:ES040268.1,
INSD:EL124160.1,INSD:ES092156.1,INSD:ES103647.1,
INSD:ES034736.1,INSD:ES130080.1,INSD:ES162003.1,
INSD:ES180598.1,INSD:ES169077.1,INSD:Z26080.1,
INSD:EL148912.1,INSD:BP615663.1,INSD:ES210331.1,
INSD:DR253727.1,INSD:ES093065.1,INSD:DR269012.1,
INSD:EL299613.1,INSD:EH985445.1,INSD:ES098047.1,
INSD:BP795415.1,INSD:ES206376.1,INSD:DR366887.1,
INSD:ES100144.1,INSD:ES084116.1,INSD:Z25582.1,
INSD:DR269013.1,INSD:ES066115.1,INSD:EL980839.1,
INSD:EH964004.1,INSD:BP782866.1,INSD:AV539040.1,
INSD:ES051050.1,INSD:BP856376.1,INSD:EL289681.1,
INSD:ES139082.1,INSD:ES165564.1,INSD:AU227759.1,
INSD:ES167085.1,INSD:EH987157.1,INSD:EH882657.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX827095.1,INSD:BX828270.1"
/note="RNA-binding (RRM/RBD/RNP motifs) family protein;
FUNCTIONS IN: nucleotide binding, nucleic acid binding;
INVOLVED IN: biological_process unknown; LOCATED IN:
ribonucleoprotein complex, chloroplast; CONTAINS InterPro
DOMAIN/s: RNA recognition motif, RNP-1
(InterPro:IPR000504), Nucleotide-binding, alpha-beta plait
(InterPro:IPR012677); BEST Arabidopsis thaliana protein
match is: RNA-binding (RRM/RBD/RNP motifs) family protein
(TAIR:AT1G07350.1); Has 51372 Blast hits to 39289 proteins
in 2480 species: Archae - 776; Bacteria - 26387; Metazoa -
6852; Fungi - 11680; Plants - 3623; Viruses - 0; Other
Eukaryotes - 2054 (source: NCBI BLink)."
/db_xref="TAIR:AT4G35785"
/db_xref="Araport:AT4G35785"
intron_pos 2:0 (1/6)
intron_pos 9:2 (2/6)
intron_pos 56:2 (3/6)
intron_pos 64:2 (4/6)
intron_pos 98:0 (5/6)
intron_pos 148:0 (6/6)
BEGIN
1 MADSPQRRRD SRSPSPRKER ARSRSRSRSR SRSRPRLRSR SRSLPRPVSP SRSRGRSRSR
61 SRGRSEVENP GTTLYVTGLS TRVTDKDLEA HFAKEGKVAS CFLVMEPRTR VSRGFAFVTM
121 SSLKDAERCI KYLNQSVLEG RYITVERKIL HQATIRDDKS THPCSTSLSE TQLDQSNRQL
181 KHNHKQLYCL NSQLSTSQRT LSSINNY
//