LOCUS AEE86557.1 620 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DEAD/DEAH box RNA helicase family
protein protein.
ACCESSION CP002687-6632
PROTEIN_ID AEE86557.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="RecQl3"
/locus_tag="AT4G35740"
/gene_synonym="A. THALIANA RECQ HELICASE 3"
/gene_synonym="ATRECQ3"
/gene_synonym="F8D20.250"
/gene_synonym="F8D20_250"
/inference="Similar to RNA sequence,
EST:INSD:AU228730.1,INSD:BP602725.1,INSD:AU237649.1,
INSD:AA597748.1,INSD:BP605998.1,INSD:ES095796.1"
/note="RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent
helicase activity; INVOLVED IN: DNA recombination; LOCATED
IN: cellular_component unknown; EXPRESSED IN: 18 plant
structures; EXPRESSED DURING: 10 growth stages; CONTAINS
InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type,
N-terminal (InterPro:IPR011545), DNA helicase,
ATP-dependent, RecQ type (InterPro:IPR004589), DNA
helicase, ATP-dependent, RecQ type, N-terminal
(InterPro:IPR018329), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
thaliana protein match is: RECQ helicase L2
(TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins
in 2765 species: Archae - 286; Bacteria - 16813; Metazoa -
3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other
Eukaryotes - 3548 (source: NCBI BLink)."
/db_xref="TAIR:AT4G35740"
/db_xref="Araport:AT4G35740"
intron_pos 25:0 (1/15)
intron_pos 72:0 (2/15)
intron_pos 83:2 (3/15)
intron_pos 111:2 (4/15)
intron_pos 141:1 (5/15)
intron_pos 192:1 (6/15)
intron_pos 224:2 (7/15)
intron_pos 226:0 (8/15)
intron_pos 276:0 (9/15)
intron_pos 300:0 (10/15)
intron_pos 322:0 (11/15)
intron_pos 364:2 (12/15)
intron_pos 396:1 (13/15)
intron_pos 436:0 (14/15)
intron_pos 472:2 (15/15)
BEGIN
1 MALKEKGIAA EYLSSTQATH VKNKIHEDLD SGKPSVRLLY VTPELIATKG FMLKLRKLHS
61 RGLLNLIAID EAHCISSWGH DFRPSYRQLS TLRDSLADVP VLALTATAAP KVQKDVIDSL
121 NLRNPLVLKS SFNRPNIFYE VRYKDLLDNA YTDLGNLLKS CGNICAIIYC LERTTCDDLS
181 VHLSSIGISS AAYHAGLNSK MRSTVLDDWL SSKKQIIVAT VAFGMGIDKK DVRMVCHFNI
241 PKSMESFYQE SGRAGRDQLP SRSVLYYGVD DRKKMEYLLR NSENKKSSSS KKPTSDFEQI
301 VTYCEGSGCR RKKILESFGE EFPVQQCKKT CDACKHPNQV AHCLEELMTT ASRRHNSSRI
361 FITSSNNKTN EGQYSEFWNR NEDGSNSNEE ISDSDDATEA ANSVTGPKLS KKLGLDEKLV
421 LLEQAEEKYY ERNKQVKKSE KNAISEALRD SSKQRLLDAL TRVLQLLACV EEIDSQKGSE
481 FLENECYRKY SKAGKSFYYS QIASTVRWLG TASRDELMTR LSSVVSLARE QEPLEEPLLA
541 TEPVENIEEE DDGKTNTVES RVDEPTQELV VSPILSPIRL PQVPSFSEFV NRRKIKQNTL
601 IDKSSEGFDD KKPAKIMKLQ
//