LOCUS AEE86530.1 1049 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transducin/WD40 repeat-like superfamily
protein protein.
ACCESSION CP002687-6602
PROTEIN_ID AEE86530.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="DAW1"
/locus_tag="AT4G35560"
/gene_synonym="DUO1-activated WD40 1"
/gene_synonym="F8D20.70"
/gene_synonym="F8D20_70"
/inference="Similar to RNA sequence,
EST:INSD:BP619000.1,INSD:ES010128.1,INSD:ES103971.1,
INSD:AV548509.1,INSD:AU228424.1,INSD:BP839416.1,
INSD:AU237378.1,INSD:EG445505.1,INSD:BP817703.1,
INSD:BP806930.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK228867.1,INSD:AK220894.1"
/note="Transducin/WD40 repeat-like superfamily protein;
FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4
RING ubiquitin ligase complex; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 7 growth stages; CONTAINS
InterPro DOMAIN/s: WD40 repeat-like-containing domain
(InterPro:IPR011046), WD40 repeat (InterPro:IPR001680),
WD40/YVTN repeat-like-containing domain
(InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781), Lethal giant larvae (Lgl) like,
C-terminal (InterPro:IPR013905); BEST Arabidopsis thaliana
protein match is: transducin family protein / WD-40 repeat
family protein (TAIR:AT5G05570.2); Has 743 Blast hits to
724 proteins in 180 species: Archae - 0; Bacteria - 29;
Metazoa - 366; Fungi - 139; Plants - 91; Viruses - 0;
Other Eukaryotes - 118 (source: NCBI BLink)."
/db_xref="TAIR:AT4G35560"
/db_xref="Araport:AT4G35560"
intron_pos 14:0 (1/20)
intron_pos 58:2 (2/20)
intron_pos 87:0 (3/20)
intron_pos 105:0 (4/20)
intron_pos 135:2 (5/20)
intron_pos 170:1 (6/20)
intron_pos 194:2 (7/20)
intron_pos 423:0 (8/20)
intron_pos 489:0 (9/20)
intron_pos 522:0 (10/20)
intron_pos 543:1 (11/20)
intron_pos 586:0 (12/20)
intron_pos 668:1 (13/20)
intron_pos 756:2 (14/20)
intron_pos 798:0 (15/20)
intron_pos 817:2 (16/20)
intron_pos 848:0 (17/20)
intron_pos 912:1 (18/20)
intron_pos 994:0 (19/20)
intron_pos 1014:0 (20/20)
BEGIN
1 MFVKKLVEIA AKKPGGSSSE GLRANDVEPR IALHYGIPSG SHLFAYDPFQ KILAVSTKDG
61 RIKLFGKDQT QALLVSEETS TSRFLEFVQN QGILLNVNSK NQIEVWDLDK KLLSHVHVFN
121 GEITSFRVMQ HTPYFYVGDS SGNVSVFKIE QDSNQVIQLE YTIPYLASNG SPIEASEDTS
181 VVSILPQLTA ESKRILLVFS SGFIALWDIK ESKPILKTGV HGMVKQDTKK ATCACWVCPS
241 GSRVSVGYSN GDILIWSIPS KGECSPESSA MICKLNLGYK SEKIPIASLK WVYAEGKASR
301 VYVIGSSSNS LQVVLLNEQT ETRMIKLGLH VSEPCADMEM IIADVNEQSK HKQDFLFVLG
361 KSGRVYAYDD YMIEKYLIQS QSKSSPSLPK ETVVKLPFSD SSSITVGKFL TNPSHLLNLS
421 DEDYAQLAKD AVPFLPFHTV PKESSRSAHF PGFTKVKNVY ITGHCDGTIS VWDMTCSFPI
481 LVLFLKEQID QDVSSRGNAA LTALHYDSNS RLLVSGDHNG MVRLYRFKPE PYLTENSFIP
541 FQGSLKKGNN HIVQSVKYIK LTGSITCIQK SQNSKHLAIG SDQGHVSLVD IEEANVLYTK
601 HIASDICPGI ISLQFESCIV QGFEKNVLVV AMRDSSVFAL DSDTGNMIGT NMIKPKKPFK
661 VLYMQILDGK QDTSGNGFDT SRESTVEEIS IRQPSVLVCS EKAIYIYSLA HVVQGVKKVL
721 HKKKFSSSPI CSASTFYGTS GVGLTLVFTD GTVEIRSLPE LSQLKQTSIR GFTYSSPKPN
781 SLPEITISAS WDGDLVMVNG DDELIVSSVL PQKETFRLVE SMNRVYKKDN SVCHEGIITS
841 SSPREKKSMF GSVFKTKSKR TTDTEPESSK ETIEELSKIF STANFPWNNN VENSREINTI
901 TRVEDEEELD IDDIDIDDHH PNQQQQEKPK EQGILSGLSK QKMANRFSNF KGKLKQMAAK
961 NEKSVVTNDE KHEEKNGATV DQIKKKYGFT SSDEMGAAKM AQSKLQDNLK KLQGISLRTT
1021 EMEDTAKSFS STAKELLNAV EFNKQSSKS
//