LOCUS AEE86436.1 626 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana P-loop containing nucleoside triphosphate
hydrolases superfamily protein protein.
ACCESSION CP002687-6460
PROTEIN_ID AEE86436.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G34910"
/gene_synonym="F11I11.150"
/gene_synonym="F11I11_150"
/inference="Similar to RNA sequence,
EST:INSD:AV521434.1,INSD:ES180853.1,INSD:ES124758.1,
INSD:ES037945.1,INSD:ES085554.1,INSD:AU236491.1,
INSD:T46809.1,INSD:BP648484.1,INSD:BP800876.1,
INSD:ES174825.1,INSD:ES069873.1,INSD:ES053083.1,
INSD:EL327944.1,INSD:EH900617.1,INSD:DR354322.1,
INSD:ES159542.1,INSD:BP640032.1,INSD:EH899340.1,
INSD:DR354321.1,INSD:BP658889.1,INSD:ES120153.1,
INSD:AU227426.1,INSD:EH920903.1,INSD:DR383623.1,
INSD:ES122447.1,INSD:CA781722.1,INSD:AV558357.1,
INSD:ES196959.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX828196.1,INSD:BT004442.1,INSD:BT002816.1"
/note="P-loop containing nucleoside triphosphate
hydrolases superfamily protein; FUNCTIONS IN: helicase
activity, ATP binding, nucleic acid binding, ATP-dependent
helicase activity; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase,
DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA
helicase, DEAD/DEAH box type, N-terminal
(InterPro:IPR011545), DEAD-like helicase, N-terminal
(InterPro:IPR014001), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
thaliana protein match is: DEA(D/H)-box RNA helicase
family protein (TAIR:AT5G60990.1); Has 35246 Blast hits to
34671 proteins in 2939 species: Archae - 524; Bacteria -
16250; Metazoa - 5646; Fungi - 4238; Plants - 2336;
Viruses - 4; Other Eukaryotes - 6248 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G34910"
/db_xref="Araport:AT4G34910"
intron_pos 82:0 (1/13)
intron_pos 136:0 (2/13)
intron_pos 166:0 (3/13)
intron_pos 209:0 (4/13)
intron_pos 242:2 (5/13)
intron_pos 280:0 (6/13)
intron_pos 324:0 (7/13)
intron_pos 346:0 (8/13)
intron_pos 408:0 (9/13)
intron_pos 440:0 (10/13)
intron_pos 486:0 (11/13)
intron_pos 513:2 (12/13)
intron_pos 603:0 (13/13)
BEGIN
1 MGKTKLKPVE DVNSEVVDEV EKAEEVEEQR NDREQEEEQK EEEAPKSFEE LGLDSRLIRA
61 LTKKGIEKPT LIQQSAIPYI LEGKDVVARA KTGSGKTLAY LLPLLQKLFS ADSVSKKKLA
121 PSAFILVPSR ELCQQVYTEV SSLIELCRVQ LKAVQLTSSM SASDMRNALA GLPEILVSTP
181 ACIPKCFAAG VLEPTAVSES LSILVLDEAD LLLSYGYEDN LRSVTSIIPR RCQCLLMSAT
241 TSSDVEKLKK LILHNPIVLT LTEDNDKEEA VPSNVQQFWI SCSAQDKLLH ILALLKLEVV
301 QKKILIFINT IDMGFRLKLF LEKFGIKSAI LNGELPQNSR LHILEQFNAG LFDYLIATDD
361 NSQTKKQKEE AKGEANKENK KNNKRSKPKL DAEFGVVRGI DFKKVHTVIN FDMPQSVTGY
421 IHRIGRTGRA YSSGSSVSLI SPDEMEGFED IKSFLASDKN KDIDIITPFP LLTENAVESL
481 RYRAEDVAKS VTKIAVRESR AQDLRNEIIN SEKLKAHFEA NPRDLDLLRH DKPLSKTAPA
541 PHLKDIPEYL VDAKTQEASK MVKLARAAMG NTRRSGGGGG RNNKNKKRSR KGSDPLKTFN
601 PNGSKRGAVG QKDGKDSSST KKQKTV
//