LOCUS AEE86416.1 215 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ribosome-binding factor A family
protein protein.
ACCESSION CP002687-6431
PROTEIN_ID AEE86416.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G34730"
/gene_synonym="RBF1"
/gene_synonym="RbfA domain-containing protein 1"
/gene_synonym="T4L20.310"
/gene_synonym="T4L20_310"
/inference="Similar to RNA sequence,
EST:INSD:DR366389.1,INSD:BP605288.1,INSD:DR384215.1,
INSD:AV555740.1,INSD:BE037673.1,INSD:DR358036.1,
INSD:EL053525.1,INSD:BP804419.1,INSD:BP656869.1,
INSD:EH991485.1,INSD:EH915958.1,INSD:EH808808.1,
INSD:EL150515.1,INSD:EH907575.1,INSD:EL311070.1,
INSD:EL275948.1,INSD:BP659880.1,INSD:BP624450.1,
INSD:EL284928.1,INSD:DR343906.1,INSD:F20163.1,
INSD:BP560637.2,INSD:EL027385.1,INSD:DR376607.1,
INSD:BP604603.1,INSD:BP796125.1,INSD:DR358182.1,
INSD:EH948259.1,INSD:EL253618.1,INSD:EL130563.1,
INSD:EL052685.1,INSD:EL286614.1,INSD:DR366387.1,
INSD:EL304704.1,INSD:AV561556.1,INSD:EH907852.1,
INSD:ES195989.1,INSD:AV782319.1,INSD:EH853342.1,
INSD:DR366388.1,INSD:DR382901.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT006250.1,INSD:BT002011.1"
/note="ribosome-binding factor A family protein; FUNCTIONS
IN: RNA binding; INVOLVED IN: rRNA processing; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Ribosome-binding factor A, conserved site
(InterPro:IPR020053), K homology-like, alpha/beta
(InterPro:IPR015946), Ribosome-binding factor A
(InterPro:IPR000238); Has 4827 Blast hits to 4826 proteins
in 1979 species: Archae - 0; Bacteria - 4129; Metazoa - 5;
Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes -
652 (source: NCBI BLink)."
/db_xref="TAIR:AT4G34730"
/db_xref="Araport:AT4G34730"
intron_pos 114:0 (1/2)
intron_pos 172:0 (2/2)
BEGIN
1 MPNLLHTNQS HFFFLHHPPI YTVSSKTQAF HFPQSMAPVN LRTNLSVRRT VRCMANPRRV
61 KMVAKQIMRE LSDMLLTDTV LQHAVLPEAA LGADRYLSSL TTISDVEVSN DLQVVKVYVS
121 VFGDDRGKDV AIAGLKSKAK YVRSELGKRM KLRLTPEVRF IEDEAMERGS RVIAILDKIK
181 AEKGSGEGKT EPSDSTEDDQ DWEVDDPDED IIYVK
//