LOCUS AEE86381.1 377 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana GTP binding protein beta 1 protein.
ACCESSION CP002687-6379
PROTEIN_ID AEE86381.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="AGB1"
/locus_tag="AT4G34460"
/gene_synonym="ARABIDOPSIS G-PROTEIN BETA SUBUNIT"
/gene_synonym="ATAGB1"
/gene_synonym="ELK4"
/gene_synonym="ERECTA-LIKE 4"
/gene_synonym="GTP binding protein beta 1"
/gene_synonym="T4L20.40"
/gene_synonym="T4L20_40"
/inference="Similar to RNA sequence,
EST:INSD:CA781376.1,INSD:EH824354.1,INSD:AV784390.1,
INSD:BP598081.1,INSD:AV817697.1,INSD:ES013354.1,
INSD:DR242269.1,INSD:EL967715.1,INSD:EL124569.1,
INSD:EG480272.1,INSD:DR374515.1,INSD:ES106836.1,
INSD:ES182895.1,INSD:EL999824.1,INSD:DR242264.1,
INSD:DR242261.1,INSD:BP632778.1,INSD:EL967518.1,
INSD:EH823911.1,INSD:EL003234.1,INSD:DR242257.1,
INSD:EL105869.1,INSD:EG480620.1,INSD:ES084730.1,
INSD:EL268443.1,INSD:ES106008.1,INSD:AV823429.1,
INSD:EL058532.1,INSD:BP625570.1,INSD:EH804668.1,
INSD:T21662.1,INSD:BP606162.1,INSD:BP843085.1,
INSD:DR242268.1,INSD:EH810501.1,INSD:BP582729.1,
INSD:DR242255.1,INSD:EG480273.1,INSD:AV560034.1,
INSD:EG480291.1,INSD:ES106307.1,INSD:EH982163.1,
INSD:BE523261.1,INSD:BP564522.1,INSD:EL968636.1,
INSD:EH842442.1,INSD:CF773749.1,INSD:BP623125.1,
INSD:R29948.1,INSD:BP793845.1,INSD:EL111758.1,
INSD:DR242253.1,INSD:EH850476.1,INSD:EH811354.1,
INSD:ES005116.1,INSD:DR242258.1,INSD:BP808401.1,
INSD:EL090328.1,INSD:BP615264.1,INSD:DR242262.1,
INSD:EH842048.1,INSD:EL014907.1,INSD:EH862865.1,
INSD:EH845373.1,INSD:ES004988.1,INSD:CD528998.1,
INSD:DR260398.1,INSD:EG462067.1,INSD:EL974618.1,
INSD:BE662901.1,INSD:ES077520.1,INSD:BP855061.1,
INSD:ES016620.1,INSD:BP821649.1,INSD:DR242256.1,
INSD:EL993892.1,INSD:EL062558.1,INSD:DR242254.1,
INSD:EL149274.1,INSD:EL220161.1,INSD:BP615852.1,
INSD:DR242266.1,INSD:EH828529.1,INSD:DR242263.1,
INSD:EL049885.1,INSD:EH975261.1,INSD:CF773344.1,
INSD:BP807525.1,INSD:DR242265.1,INSD:DR242251.1,
INSD:EG480292.1,INSD:AI994586.1,INSD:DR242260.1,
INSD:DR242252.1,INSD:ES171631.1,INSD:EL107767.1,
INSD:BP793989.1,INSD:DR242259.1,INSD:AV794958.1"
/inference="Similar to RNA sequence,
mRNA:INSD:U12232.1,INSD:BX828861.1,INSD:AY045860.1,
INSD:BT020366.1"
/note="GTP binding protein beta 1 (AGB1); FUNCTIONS IN:
protein binding, GTPase activity, nucleotide binding;
INVOLVED IN: in 11 processes; LOCATED IN: endoplasmic
reticulum, plasma membrane, CUL4 RING ubiquitin ligase
complex, heterotrimeric G-protein complex; EXPRESSED IN:
26 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: WD40 repeat 2
(InterPro:IPR019782), WD40 repeat, conserved site
(InterPro:IPR019775), Guanine nucleotide-binding protein,
beta subunit (InterPro:IPR016346), WD40 repeat
(InterPro:IPR001680), G-protein beta WD-40 repeat, region
(InterPro:IPR020472), G-protein, beta subunit
(InterPro:IPR001632), WD40 repeat-like-containing domain
(InterPro:IPR011046), WD40-repeat-containing domain
(InterPro:IPR017986), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: WD-40 repeat family protein (TAIR:AT5G67320.1);
Has 60281 Blast hits to 28762 proteins in 834 species:
Archae - 58; Bacteria - 8505; Metazoa - 23635; Fungi -
12687; Plants - 7683; Viruses - 0; Other Eukaryotes - 7713
(source: NCBI BLink)."
/db_xref="TAIR:AT4G34460"
/db_xref="Araport:AT4G34460"
intron_pos 36:1 (1/5)
intron_pos 68:0 (2/5)
intron_pos 209:2 (3/5)
intron_pos 329:0 (4/5)
intron_pos 367:0 (5/5)
BEGIN
1 MSVSELKERH AVATETVNNL RDQLRQRRLQ LLDTDVARYS AAQGRTRVSF GATDLVCCRT
61 LQGHTGKVYS LDWTPERNRI VSASQDGRLI VWNALTSQKT HAIKLPCAWV MTCAFSPNGQ
121 SVACGGLDSV CSIFSLSSTA DKDGTVPVSR MLTGHRGYVS CCQYVPNEDA HLITSSGDQT
181 CILWDVTTGL KTSVFGGEFQ SGHTADVLSV SISGSNPNWF ISGSCDSTAR LWDTRAASRA
241 VRTFHGHEGD VNTVKFFPDG YRFGTGSDDG TCRLYDIRTG HQLQVYQPHG DGENGPVTSI
301 AFSVSGRLLF AGYASNNTCY VWDTLLGEVV LDLGLQQDSH RNRISCLGLS ADGSALCTGS
361 WDSNLKIWAF GGHRRVI
//