LOCUS AEE86354.1 783 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transducin family protein / WD-40
repeat family protein protein.
ACCESSION CP002687-6339
PROTEIN_ID AEE86354.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G34280"
/gene_synonym="DHU1"
/gene_synonym="DWD HYPERSENSITIVE TO UV-B 1"
/gene_synonym="F10M10.50"
/gene_synonym="F10M10_50"
/inference="Similar to RNA sequence,
EST:INSD:EL218255.1,INSD:ES091257.1,INSD:AU238139.1,
INSD:BX838983.1,INSD:N97013.1,INSD:BX837296.1,
INSD:BX835376.1,INSD:BX834342.1,INSD:ES154802.1,
INSD:EH824705.1,INSD:ES102273.1,INSD:BX834209.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK117309.1,INSD:BT005961.1"
/note="transducin family protein / WD-40 repeat family
protein; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein
32 family A, C-terminal (InterPro:IPR003603), WD40 repeat
2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680),
WD40 repeat-like-containing domain (InterPro:IPR011046),
WD40-repeat-containing domain (InterPro:IPR017986),
WD40/YVTN repeat-like-containing domain
(InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: Transducin/WD40 repeat-like superfamily protein
(TAIR:AT1G61210.2); Has 5718 Blast hits to 4596 proteins
in 341 species: Archae - 5; Bacteria - 811; Metazoa -
2365; Fungi - 1046; Plants - 644; Viruses - 0; Other
Eukaryotes - 847 (source: NCBI BLink)."
/db_xref="TAIR:AT4G34280"
/db_xref="Araport:AT4G34280"
intron_pos 13:2 (1/9)
intron_pos 36:0 (2/9)
intron_pos 119:2 (3/9)
intron_pos 297:0 (4/9)
intron_pos 503:0 (5/9)
intron_pos 651:0 (6/9)
intron_pos 716:0 (7/9)
intron_pos 736:0 (8/9)
intron_pos 757:0 (9/9)
BEGIN
1 MATLTEIATL EEKYIELCKM HGILPNTAIL SAFFEAEVKK SRNQRCIMNL YVDRVKYDDY
61 LPLLELCNEI NTSEVQGIDL FVRSACSLED HYALPLIRSV NQKLRVVHLH DSFGKNFWQD
121 VFFQGLSCKV LNVRSMHIHK LNIVGEFTQL HTLILDKNRI VGFGEDCFSC MPKLTYLSMC
181 DTLVSDLWTS AAALLKLPSL KELRFQIWIS CSDSSPLNSE SSPSSSTKDD INTFIESDPP
241 VEADMWDVAE QMDPSLPVEE TLHSMDFSYK IPEQDDLDSH VSVSAGLNGE VLMREKVRRG
301 KMPYQPKDVS PVDTFTRQFG NVGLKYISSK ASPICSEKHY RMYMINSLPK LQVLDNLAIR
361 KSDRDKAIET YSANFEDLPY KRKKESVVRV LENREKRSSK GKSQNSYKRS LCAAKMGSPA
421 SPLLHSLPFL SSRIQQEDDN SRLCPRQFEY HPLDPSLMVF GTLDGEVVVL NHESGKIFRY
481 IPSNGSQSTI LGLCWLKIYP SMVIAGSANG SLKLYDIQKA SSTVTTSSHS TSGSVTFDEF
541 DQLTSVHANS TDQLFLASGY SKDVALYDIG RGTRLQVFAN MHQEHINVVK FSNHSPFLFA
601 TSSFDKDVKL WDLRQEPSRP CYTASSTKGN VMVCFSPDDR YLLASAVDNE VRQLLTVDGR
661 LHLNFEIVPR VSSMNYTRSY YMNGNDYIIS GSCDENVIRV CCAQTGRRLR DVTLEGNGSD
721 FSMMYVQSLR GDPFRDFNMS VLAAYARSSS LSEIVKVNLL ASRDSTAEES HGLRSYPSSS
781 MGG
//