LOCUS AEE86339.1 603 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana D-3-phosphoglycerate dehydrogenase protein.
ACCESSION CP002687-6319
PROTEIN_ID AEE86339.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="EDA9"
/locus_tag="AT4G34200"
/gene_synonym="embryo sac development arrest 9"
/gene_synonym="F10M10.7"
/gene_synonym="PGDH1"
/gene_synonym="phosphoglycerate dehydrogenase 1"
/inference="Similar to RNA sequence,
EST:INSD:DR350741.1,INSD:DR350766.1,INSD:DR350578.1,
INSD:DR350624.1,INSD:BP603404.1,INSD:EL313296.1,
INSD:DR281291.1,INSD:DR350683.1,INSD:BP778706.1,
INSD:ES055804.1,INSD:DR281282.1,INSD:BP822770.1,
INSD:AI996638.1,INSD:DR350635.1,INSD:DR350598.1,
INSD:ES082037.1,INSD:ES175574.1,INSD:DR281277.1,
INSD:DR350589.1,INSD:EL101203.1,INSD:DR281279.1,
INSD:DR350626.1,INSD:DR350628.1,INSD:DR350656.1,
INSD:DR350605.1,INSD:BP859811.1,INSD:DR281347.1,
INSD:BP822567.1,INSD:BE521844.1,INSD:ES159160.1,
INSD:BP645334.1,INSD:DR350695.1,INSD:AV821458.1,
INSD:DR350672.1,INSD:DR281257.1,INSD:DR350677.1,
INSD:ES014760.1,INSD:DR350702.1,INSD:DR350588.1,
INSD:DR373720.1,INSD:EL985474.1,INSD:DR350649.1,
INSD:DR350691.1,INSD:DR350716.1,INSD:DR281292.1,
INSD:DR350585.1,INSD:Z34025.1,INSD:DR281298.1,
INSD:BP567009.1,INSD:DR350755.1,INSD:DR350600.1,
INSD:DR281336.1,INSD:DR350654.1,INSD:DR350704.1,
INSD:EL038383.1,INSD:DR281285.1,INSD:DR350686.1,
INSD:DR350634.1,INSD:EL161715.1,INSD:DR350640.1,
INSD:DR281318.1,INSD:BP783338.1,INSD:EL124655.1,
INSD:BP820160.1,INSD:DR350675.1,INSD:BP827913.1,
INSD:BP654588.1,INSD:DR350609.1,INSD:DR350618.1,
INSD:EL978315.1,INSD:EL172206.1,INSD:DR350610.1,
INSD:EH898991.1,INSD:EH930970.1,INSD:DR350627.1,
INSD:DR281316.1,INSD:DR281308.1,INSD:DR281304.1,
INSD:ES097791.1,INSD:DR350706.1,INSD:DR281261.1,
INSD:DR281286.1,INSD:DR261205.1,INSD:DR350621.1,
INSD:DR350616.1,INSD:AV547517.1,INSD:DR350593.1,
INSD:ES147268.1,INSD:DR261201.1,INSD:DR260377.1,
INSD:DR260370.1,INSD:DR350736.1,INSD:DR281284.1,
INSD:T22482.1,INSD:DR281345.1,INSD:DR281328.1,
INSD:DR350722.1,INSD:EL994905.1,INSD:EH864167.1,
INSD:DR350607.1,INSD:DR350697.1,INSD:EL969225.1,
INSD:ES193192.1,INSD:AV540813.1,INSD:DR350650.1,
INSD:DR281272.1,INSD:DR350622.1,INSD:DR281266.1,
INSD:DR350744.1,INSD:DR350715.1,INSD:DR281258.1,
INSD:DR281319.1,INSD:EL090650.1,INSD:DR350632.1,
INSD:DR260369.1,INSD:DR350573.1,INSD:BP779900.1,
INSD:DR350693.1,INSD:DR350594.1,INSD:DR281326.1,
INSD:AV551152.1,INSD:EH831438.1,INSD:DR350572.1,
INSD:DR281332.1,INSD:BP848025.1,INSD:DR350576.1,
INSD:EL066371.1,INSD:BP575978.1,INSD:DR350754.1,
INSD:DR350663.1,INSD:DR350742.1,INSD:DR350647.1,
INSD:DR350608.1,INSD:DR350756.1,INSD:DR350753.1,
INSD:ES024974.1,INSD:DR350604.1,INSD:DR350583.1,
INSD:DR350703.1,INSD:BP645494.1,INSD:BP643292.1,
INSD:DR350749.1,INSD:DR350743.1,INSD:DR350748.1,
INSD:DR350762.1,INSD:DR350701.1,INSD:DR281256.1,
INSD:DR350652.1,INSD:DR260367.1,INSD:BP650747.1,
INSD:DR281270.1,INSD:DR350577.1,INSD:DR281264.1,
INSD:DR350648.1,INSD:CB185750.2,INSD:BP804379.1,
INSD:DR350682.1,INSD:DR350584.1,INSD:DR350707.1,
INSD:DR350725.1,INSD:DR281306.1,INSD:BP602882.1,
INSD:EL304663.1,INSD:ES103532.1,INSD:AV566243.1,
INSD:DR350752.1,INSD:DR281281.1,INSD:EG428857.1,
INSD:DR350580.1,INSD:DR350625.1,INSD:DR350747.1,
INSD:DR350674.1,INSD:DR350729.1,INSD:DR350688.1,
INSD:DR350759.1,INSD:DR350581.1,INSD:DR350726.1,
INSD:DR350623.1,INSD:BP820236.1,INSD:DR350757.1,
INSD:DR350602.1,INSD:DR350643.1,INSD:DR350642.1,
INSD:BP640410.1,INSD:DR281324.1,INSD:DR281307.1,
INSD:ES101544.1,INSD:BX839211.1,INSD:DR350735.1,
INSD:DR281271.1,INSD:DR260366.1,INSD:DR230209.1,
INSD:DR350660.1,INSD:EL203080.1,INSD:DR350664.1,
INSD:DR350667.1,INSD:W43188.1,INSD:BP601608.1,
INSD:DR350711.1,INSD:DR350698.1,INSD:DR350731.1,
INSD:ES027149.1,INSD:DR281343.1,INSD:DR350692.1,
INSD:DR281295.1,INSD:DR281325.1,INSD:DR281263.1,
INSD:EL027471.1,INSD:EL301315.1,INSD:DR281267.1,
INSD:EL084224.1,INSD:DR350595.1,INSD:DR350658.1,
INSD:DR350723.1,INSD:DR350653.1,INSD:EH931386.1,
INSD:ES080688.1,INSD:BP777231.1,INSD:DR281341.1,
INSD:BP633946.1,INSD:DR281288.1,INSD:AV804433.1,
INSD:DR281273.1,INSD:DR350659.1,INSD:DR281344.1,
INSD:EL243174.1,INSD:DR281310.1,INSD:ES162598.1,
INSD:DR350636.1,INSD:DR350612.1,INSD:BP821008.1,
INSD:ES025311.1,INSD:DR350613.1,INSD:BP596610.1,
INSD:DR281269.1,INSD:EL142039.1,INSD:EG428855.1,
INSD:AV551564.1,INSD:DR261204.1,INSD:DR350689.1,
INSD:EL227035.1,INSD:DR281342.1,INSD:DR281340.1,
INSD:DR260371.1,INSD:BP788348.1,INSD:DR350745.1,
INSD:DR350579.1,INSD:DR350733.1,INSD:DR350760.1,
INSD:DR281333.1,INSD:DR281262.1,INSD:DR350732.1,
INSD:EL253762.1,INSD:AV538904.1,INSD:DR350764.1,
INSD:DR350714.1,INSD:EL267502.1,INSD:EL117443.1,
INSD:DR350601.1,INSD:DR281313.1,INSD:DR260372.1,
INSD:DR350687.1,INSD:ES033134.1,INSD:AV829109.1,
INSD:DR350641.1,INSD:DR281299.1,INSD:EH918624.1,
INSD:EH840795.1,INSD:DR350767.1,INSD:BP603598.1,
INSD:DR281278.1,INSD:DR281317.1,INSD:DR350639.1,
INSD:DR281265.1,INSD:EG520857.1,INSD:DR350740.1,
INSD:AV781915.1,INSD:DR350630.1,INSD:DR281337.1,
INSD:ES164430.1,INSD:DR350730.1,INSD:DR350670.1,
INSD:DR281320.1,INSD:DR281311.1,INSD:DR350680.1,
INSD:DR350709.1,INSD:DR281334.1,INSD:EH852457.1,
INSD:DR350671.1,INSD:DR271202.1,INSD:DR281290.1,
INSD:AV538828.1,INSD:ES007068.1,INSD:DR350758.1,
INSD:DR350681.1,INSD:BP858446.1,INSD:DR350728.1,
INSD:DR281259.1,INSD:DR350673.1,INSD:ES073956.1,
INSD:DR281339.1,INSD:DR350586.1,INSD:AV793420.1,
INSD:EL163748.1,INSD:DR281274.1,INSD:DR350712.1,
INSD:DR350665.1,INSD:DR350619.1,INSD:BP606441.1,
INSD:DR281280.1,INSD:DR350751.1,INSD:DR350734.1,
INSD:BP839390.1,INSD:DR281268.1,INSD:DR350696.1,
INSD:DR350575.1,INSD:DR350661.1,INSD:DR350651.1,
INSD:DR281283.1,INSD:DR350699.1,INSD:DR281321.1,
INSD:DR261199.1,INSD:DR350690.1,INSD:DR350606.1,
INSD:ES104428.1,INSD:DR281322.1,INSD:DR350644.1,
INSD:DR281331.1,INSD:DR281275.1,INSD:DR350597.1,
INSD:DR350705.1,INSD:DR350719.1,INSD:DR281301.1,
INSD:DR350765.1,INSD:DR350724.1,INSD:DR350668.1,
INSD:DR350678.1,INSD:DR281338.1,INSD:DR281276.1,
INSD:ES163367.1,INSD:DR350615.1,INSD:AV532312.1,
INSD:DR350655.1,INSD:EH899609.1,INSD:BE521845.1,
INSD:EL232083.1,INSD:EL155700.1,INSD:DR380255.1,
INSD:DR281305.1,INSD:DR350737.1,INSD:EG520868.1,
INSD:DR350599.1,INSD:DR281323.1,INSD:DR261203.1,
INSD:DR281293.1,INSD:DR350582.1,INSD:DR281312.1,
INSD:DR350631.1,INSD:DR281329.1,INSD:DR350738.1,
INSD:DR350700.1,INSD:DR350713.1,INSD:AV539166.1,
INSD:BP594349.1,INSD:DR350617.1,INSD:BP577000.1,
INSD:DR350676.1,INSD:DR350591.1,INSD:DR350596.1,
INSD:ES131692.1,INSD:DR281309.1,INSD:DR350574.1,
INSD:DR350633.1,INSD:EG480911.1,INSD:DR350603.1,
INSD:DR281294.1,INSD:DR350638.1,INSD:EL032177.1,
INSD:DR350763.1,INSD:DR350637.1,INSD:ES011521.1,
INSD:ES086376.1,INSD:DR260378.1,INSD:DR350720.1,
INSD:DR350645.1,INSD:DR281260.1,INSD:DR350666.1,
INSD:DR260368.1,INSD:DR350611.1,INSD:DR281302.1,
INSD:AV547648.1,INSD:AV539403.1,INSD:EL990880.1,
INSD:DR281297.1,INSD:DR281289.1,INSD:DR350614.1,
INSD:DR281315.1,INSD:DR281296.1,INSD:DR350679.1,
INSD:DR350646.1,INSD:DR350685.1,INSD:DR350750.1,
INSD:DR350717.1,INSD:DR350739.1,INSD:DR281327.1,
INSD:DR281314.1,INSD:EL116638.1,INSD:DR350590.1,
INSD:AV547913.1,INSD:BP579064.1,INSD:DR281300.1,
INSD:DR281287.1,INSD:DR350620.1,INSD:DR350629.1,
INSD:BP806262.1,INSD:DR281303.1,INSD:DR350657.1,
INSD:DR350662.1,INSD:DR260373.1,INSD:DR350694.1,
INSD:DR350684.1,INSD:AV547563.1,INSD:DR281330.1,
INSD:BP650115.1,INSD:AV541312.1,INSD:DR350718.1,
INSD:AV539628.1,INSD:DR350721.1,INSD:DR350669.1,
INSD:DR281335.1,INSD:Z34777.1,INSD:BP826208.1,
INSD:ES100315.1,INSD:DR350761.1,INSD:BE037988.1,
INSD:DR350708.1,INSD:DR281346.1,INSD:DR260374.1,
INSD:DR350746.1,INSD:DR350727.1,INSD:EL009301.1,
INSD:BP665632.1,INSD:DR350592.1,INSD:DR350710.1,
INSD:AV531915.1,INSD:BP832312.1,INSD:BP839439.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY084236.1,INSD:AK221892.1,INSD:AY150462.1,
INSD:AY063810.1"
/note="embryo sac development arrest 9 (EDA9); FUNCTIONS
IN: ATP binding; INVOLVED IN: megagametogenesis; LOCATED
IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 26
plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate
dehydrogenase (InterPro:IPR006236), D-isomer specific
2-hydroxyacid dehydrogenase, catalytic domain
(InterPro:IPR006139), D-isomer specific 2-hydroxyacid
dehydrogenase, NAD-binding (InterPro:IPR006140),
D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508),
Amino acid-binding ACT (InterPro:IPR002912),
NAD(P)-binding domain (InterPro:IPR016040); BEST
Arabidopsis thaliana protein match is:
D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1); Has
30608 Blast hits to 30602 proteins in 2772 species: Archae
- 489; Bacteria - 18520; Metazoa - 741; Fungi - 1175;
Plants - 586; Viruses - 5; Other Eukaryotes - 9092
(source: NCBI BLink)."
/db_xref="TAIR:AT4G34200"
/db_xref="Araport:AT4G34200"
intron_pos 186:1 (1/3)
intron_pos 349:0 (2/3)
intron_pos 381:0 (3/3)
BEGIN
1 MSATAAASSS IAVATNSLRN VTLSSRSPLP SAISVAFPSR GRNTLQRRLV LVSCSTGDGS
61 KPTILVAEKL GDAGIKLLED VANVDCSYNM TPEELNIKIS LCDALIVRSG TKVGREVFES
121 SHGRLKVVGR AGVGIDNVDL SAATEFGCLV VNAPTANTIA AAEHGIALMA AMARNVAQAD
181 ASVKAGEWKR NKYVGVSLVG KTLAVLGFGK VGTEVARRAK GLGMRVIAHD PYAPADRAHA
241 IGVDLVSFDE ALATADFISL HMPLTPTTSK ILNDETFAKM KKGVRIVNVA RGGVIDEDAL
301 VRALDAGIVA QAALDVFTKE PPAKDSKLVQ HERVTVTPHL GASTMEAQEG VAIEIAEAVV
361 GALNGELAAT AVNAPMVSAE VLTELKPYVV LAEKLGRLAV QLVAGGSGVK NAKITYASAR
421 ATDDLDTRLL RAMITKGIIE PISDVYVNLV NADFTAKQRG LRLSEERVLL DGSPESPLET
481 ITVQLSNVES KFASSLSESG EVKVEGKVKD GVPHLTKVGS FEVDVTLEGS IILCRQVDQP
541 GMIGTVGSIL GESNVNVNFM SVGRIAPRKQ AIMAIGVDDI PSKETLKKIG EIPAVEEFVF
601 LKL
//