LOCUS AEE86324.1 1107 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002687-6296
PROTEIN_ID AEE86324.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="CER9"
/locus_tag="AT4G34100"
/gene_synonym="ECERIFERUM 9"
/gene_synonym="F28A23.140"
/gene_synonym="F28A23_140"
/gene_synonym="SUD1"
/gene_synonym="SUPPRESSOR OF DRY2 DEFECTS 1"
/inference="Similar to RNA sequence,
EST:INSD:EH822086.1,INSD:BP798593.1,INSD:EL224014.1,
INSD:EL076663.1,INSD:EL275831.1,INSD:EG517513.1,
INSD:EL138020.1,INSD:AV522850.1,INSD:EH958636.1,
INSD:EL298162.1,INSD:EL220224.1,INSD:EH850647.1,
INSD:ES111737.1,INSD:EH946410.1,INSD:EH985975.1,
INSD:ES102643.1,INSD:EL043489.1,INSD:CB185904.1,
INSD:ES049669.1,INSD:EL149869.1,INSD:EH949141.1,
INSD:EG518174.1,INSD:AV528384.1,INSD:BP647193.1,
INSD:EL034229.1,INSD:EL969874.1,INSD:EH941225.1,
INSD:EG518173.1,INSD:EL019816.1,INSD:EL311531.1,
INSD:EG517512.1,INSD:BP841106.1,INSD:EL027118.1,
INSD:T41618.1,INSD:EH957573.1,INSD:BP823876.1,
INSD:ES105936.1,INSD:EL248966.1,INSD:BP655861.1,
INSD:EH951261.1,INSD:EL227317.1,INSD:EH882911.1,
INSD:EL143296.1,INSD:EL143913.1,INSD:EH956806.1,
INSD:AV441358.1,INSD:ES201789.1,INSD:BP650968.1,
INSD:EH995081.1,INSD:EL986146.1,INSD:EH889695.1,
INSD:EH949193.1,INSD:BP830480.1,INSD:AU239171.1,
INSD:EL301039.1,INSD:BP813200.1,INSD:EH844949.1,
INSD:EL006219.1,INSD:EL240946.1,INSD:EH958238.1,
INSD:EL123686.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK118311.1,INSD:BX828852.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type
(InterPro:IPR018957), Zinc finger, RING-CH-type
(InterPro:IPR011016); BEST Arabidopsis thaliana protein
match is: RING/FYVE/PHD zinc finger superfamily protein
(TAIR:AT4G32670.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G34100"
/db_xref="Araport:AT4G34100"
intron_pos 113:0 (1/8)
intron_pos 341:0 (2/8)
intron_pos 595:0 (3/8)
intron_pos 665:2 (4/8)
intron_pos 788:2 (5/8)
intron_pos 841:1 (6/8)
intron_pos 896:0 (7/8)
intron_pos 945:0 (8/8)
BEGIN
1 MEISPADSLS ISGAAASEVV SEPSVSSSSS SSSPNQASPN PFSNMDPAVS TATGSRYVDD
61 DEDEEDVCRI CRNPGDADNP LRYPCACSGS IKFVHQDCLL QWLNHSNARQ CEVCKHPFSF
121 SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR
181 TFGEAQRLFL SHISTTVILT DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD
241 DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
301 AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG
361 RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA LTAVSNLTSE GQGNGLLGQL
421 TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA
481 LIRYAKGEPL TVGRFYGIAS IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC
541 GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
601 LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF
661 PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL LRCWFTGVGW ALGLTDFLLP
721 RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED
781 DDEQSDSEYN FVVRIILLLL VAWVTLLLFN SALIVVPVSL GRALFSAIPI LPITHGIKCN
841 DLYAFVIGTY AFWTTISGAR YAIEHVKSKR TSVLLNQIWK WCGIVFKSSV LLAIWVFIIP
901 VLIGLLFELL VIVPMRVPVD ESPVFLLYQD WALGLIFLKI WTRLVMLDHM LPIVDDSWRA
961 KFERVREDGF SRLQGLWVLR EIVFPIVMKL LTALCVPYVL ARGVFPMLGY PLVVNSAVYR
1021 FAWIGCLSVS LFCFCAKRCH VWFRNLHNSI RDDRYLIGRR LHNFGEAALA NQNQNQSSED
1081 AGDGVLIGRE GDVDNGLRLR RAIQQEA
//