LOCUS AEE86318.1 313 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Calcium-binding EF-hand family protein
protein.
ACCESSION CP002687-6290
PROTEIN_ID AEE86318.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G34070"
/gene_synonym="F28A23.170"
/gene_synonym="F28A23_170"
/inference="Similar to RNA sequence,
EST:INSD:AV555279.1,INSD:EL313452.1,INSD:EL135814.1,
INSD:DR231019.1,INSD:EH863807.1,INSD:BP563373.1,
INSD:ES109286.1,INSD:EH890706.1,INSD:BP651351.1,
INSD:BP623057.1,INSD:EL231118.1,INSD:DR375955.1,
INSD:EL039573.1,INSD:EL036105.1,INSD:EH882992.1,
INSD:BP868066.1,INSD:ES190291.1,INSD:AV795720.1,
INSD:EH862899.1,INSD:EL153887.1,INSD:EH801184.1,
INSD:BP669316.1,INSD:ES086322.1,INSD:BP599046.1,
INSD:BP802378.1,INSD:EL336549.1,INSD:BP561051.1,
INSD:EL178666.1,INSD:ES088390.1,INSD:EH896935.1,
INSD:EH923700.1,INSD:EH909495.1,INSD:EL166286.1,
INSD:EL266527.1,INSD:ES083135.1,INSD:EL055735.1,
INSD:EH951396.1,INSD:EL196574.1,INSD:AV784688.1,
INSD:BP646959.1,INSD:EL079719.1,INSD:BP660928.1,
INSD:EH804086.1,INSD:EH992013.1,INSD:EL256249.1,
INSD:EL330808.1,INSD:EL007051.1,INSD:EH988202.1,
INSD:ES179874.1,INSD:AV784604.1,INSD:AV540707.1,
INSD:EL281770.1,INSD:BP662693.1,INSD:EL155610.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY081558.1"
/note="Calcium-binding EF-hand family protein; FUNCTIONS
IN: calcium ion binding; INVOLVED IN: biological_process
unknown; LOCATED IN: chloroplast; CONTAINS InterPro
DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like
domain (InterPro:IPR011992); BEST Arabidopsis thaliana
protein match is: TLD-domain containing nucleolar protein
(TAIR:AT5G06260.1); Has 171 Blast hits to 168 proteins in
64 species: Archae - 0; Bacteria - 0; Metazoa - 68; Fungi
- 2; Plants - 46; Viruses - 0; Other Eukaryotes - 55
(source: NCBI BLink)."
/db_xref="TAIR:AT4G34070"
/db_xref="Araport:AT4G34070"
intron_pos 18:2 (1/7)
intron_pos 64:2 (2/7)
intron_pos 99:0 (3/7)
intron_pos 134:0 (4/7)
intron_pos 162:2 (5/7)
intron_pos 242:1 (6/7)
intron_pos 305:2 (7/7)
BEGIN
1 MNLVVSSSCL PPFIFCSLSG RSIKNNRRTE TTKPAGELRG EKNPAKKGNS NSSSVDHCFT
61 SASRAFTQKK LADLKSLFFS LASKSQSNDQ YVSYPVFQEY FGLSGSLGER IFDMVTQHRK
121 DDKMTFEDLV IAKATYEKGT DDEIAEFIYQ TLDVNGNGVL RRSDLESFLV VILKSVFSTE
181 SSDAESSDYK EMVDALLDAA TFSKSDDGSE KGMSFEDFRS WCPLVPTIRK FLGSLLIPPG
241 PVRPGYQVPD LLYEDSVSSD RLLLKKEYAW HIGGALPHHE LVEWKLLYRS SLHGQSFNTF
301 LGHTSGMEGS NMA
//