LOCUS AEE86317.1 957 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana demeter-like protein 3 protein.
ACCESSION CP002687-6287
PROTEIN_ID AEE86317.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="DML3"
/locus_tag="AT4G34060"
/gene_synonym="demeter-like protein 3"
/gene_synonym="F28A23.180"
/gene_synonym="F28A23_180"
/inference="Similar to RNA sequence,
EST:INSD:EG468511.1,INSD:EG468520.1,INSD:EG468531.1,
INSD:EG468403.1,INSD:EG468515.1,INSD:EG468461.1,
INSD:EG468537.1,INSD:EG468528.1,INSD:EG468439.1,
INSD:EG468416.1,INSD:EL086532.1,INSD:EG468533.1,
INSD:EG468456.1,INSD:EG468457.1,INSD:EG468514.1,
INSD:EG468524.1,INSD:EG468505.1,INSD:EG468535.1,
INSD:EG468517.1,INSD:EG468460.1,INSD:EG468526.1,
INSD:EG468516.1,INSD:EG468523.1,INSD:EG468437.1,
INSD:EG468539.1,INSD:EG468532.1"
/note="demeter-like protein 3 (DML3); CONTAINS InterPro
DOMAIN/s: DNA glycosylase (InterPro:IPR011257),
Endonuclease III-like, iron-sulphur cluster loop motif
(InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265);
BEST Arabidopsis thaliana protein match is: HhH-GPD base
excision DNA repair family protein (TAIR:AT5G04560.1); Has
30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="TAIR:AT4G34060"
/db_xref="Araport:AT4G34060"
intron_pos 33:1 (1/18)
intron_pos 63:1 (2/18)
intron_pos 251:1 (3/18)
intron_pos 297:1 (4/18)
intron_pos 404:1 (5/18)
intron_pos 434:2 (6/18)
intron_pos 555:0 (7/18)
intron_pos 581:2 (8/18)
intron_pos 610:0 (9/18)
intron_pos 640:2 (10/18)
intron_pos 663:2 (11/18)
intron_pos 676:0 (12/18)
intron_pos 703:2 (13/18)
intron_pos 855:2 (14/18)
intron_pos 868:0 (15/18)
intron_pos 887:1 (16/18)
intron_pos 933:0 (17/18)
intron_pos 955:0 (18/18)
BEGIN
1 MLTDGSQHTY QNGETKNSKE HERKCDESAH LQDNSQTTHK KKEKKNSKEK HGIKHSESEH
61 LQDDISQRVT GKGRRRNSKG TPKKLRFNRP RILEDGKKPR NPATTRLRTI SNKRRKKDID
121 SEDEVIPELA TPTKESFPKR RKNEKIKRSV ARTLNFKQEI VLSCLEFDKI CGPIFPRGKK
181 RTTTRRRYDF LCFLLPMPVW KKQSRRSKRR KNMVRWARIA SSSKLLEETL PLIVSHPTIN
241 GQADASLHID DTLVRHVVSK QTKKSANNVI EHLNRQITYQ KDHGLSSLAD VPLHIEDTLI
301 KSASSVLSER PIKKTKDIAK LIKDMGRLKI NKKVTTMIKA DKKLVTAKVN LDPETIKEWD
361 VLMVNDSPSR SYDDKETEAK WKKEREIFQT RIDLFINRMH RLQGNRKFKQ WKGSVVDSVV
421 GVFLTQNTTD YLSSNAFMSV AAKFPVDARE GLSYYIEEPQ DAKSSECIIL SDESISKVED
481 HENTAKRKNE KTGIIEDEIV DWNNLRRMYT KEGSRPEMHM DSVNWSDVRL SGQNVLETTI
541 KKRGQFRILS ERILKFLNDE VNQNGNIDLE WLRNAPSHLV KRYLLEIEGI GLKSAECVRL
601 LGLKHHAFPV DTNVGRIAVR LGLVPLEPLP NGVQMHQLFE YPSMDSIQKY LWPRLCKLPQ
661 ETLYELHYQM ITFGKVFCTK TIPNCNACPM KSECKYFASA YVSSKVLLES PEEKMHEPNT
721 FMNAHSQDVA VDMTSNINLV EECVSSGCSD QAICYKPLVE FPSSPRAEIP ESTDIEDVPF
781 MNLYQSYASV PKIDFDLDAL KKSVEDALVI SGRMSSSDEE ISKALVIPTP ENACIPIKPP
841 RKMKYYNRLR TEHVVYVLPD NHELLHDFER RKLDDPSPYL LAIWQPGETS SSFVPPKKKC
901 SSDGSKLCKI KNCSYCWTIR EQNSNIFRGT ILIPCRTAMR GAFPLNGTYF QTNEGVV
//