LOCUS AEE86313.1 666 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002687-6281
PROTEIN_ID AEE86313.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="MBR2"
/locus_tag="AT4G34040"
/gene_synonym="F28A23.200"
/gene_synonym="F28A23_200"
/gene_synonym="MED25 BINDING RING-H2 PROTEIN 2"
/inference="Similar to RNA sequence,
EST:INSD:ES174308.1,INSD:BP805790.1,INSD:EH798135.1,
INSD:ES043147.1,INSD:ES117220.1,INSD:ES062533.1,
INSD:EL034227.1,INSD:EH921044.1,INSD:BE522294.1,
INSD:ES026427.1,INSD:BP796251.1,INSD:EL224294.1,
INSD:EL195907.1,INSD:EL306026.1,INSD:ES091892.1,
INSD:BP824903.1,INSD:EL074881.1,INSD:EH843998.1,
INSD:BE522293.1,INSD:AV554854.1,INSD:EH884545.1,
INSD:AU237756.1,INSD:AU228844.1,INSD:BE526838.1,
INSD:DR353170.1,INSD:ES010638.1,INSD:EL324496.1,
INSD:EL988796.1,INSD:ES184365.1,INSD:EL223479.1,
INSD:AV545855.1,INSD:ES168368.1,INSD:BP820371.1,
INSD:ES099953.1,INSD:ES154004.1,INSD:EL212346.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT015366.1,INSD:BX828478.1,INSD:BT020341.1,
INSD:AK229265.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc
finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana
protein match is: RING/U-box superfamily protein
(TAIR:AT2G15530.3); Has 8873 Blast hits to 7809 proteins
in 315 species: Archae - 0; Bacteria - 89; Metazoa - 2441;
Fungi - 580; Plants - 3871; Viruses - 41; Other Eukaryotes
- 1851 (source: NCBI BLink)."
/db_xref="TAIR:AT4G34040"
/db_xref="Araport:AT4G34040"
intron_pos 526:0 (1/4)
intron_pos 543:0 (2/4)
intron_pos 576:0 (3/4)
intron_pos 624:0 (4/4)
BEGIN
1 MQGPRSTGDS STGINYADGE PICSTNSETT SNNILNPVDV QFPNNTTGSG RPTYASSSSH
61 VVQNHNWWSF GESSSRLGPS DHLNSNGSKT DRQLLSDGYG FEEGQSGMLL PGESFLRGSS
121 SSHMLSHVNL GKDMDIGSGL QTSGVVIRHN NCETSLGSSS QTAEERSSGP GSSLGGLGSS
181 CKRKALEGAP SHSFPGESHG CFFQTENGAW NEGLAQYDAS SSLSLSMPSQ NSPNVNNQSG
241 LPEPRFGLGG GRAVTASAFP STRSTETISR PGRRLNPGQP PESVAFSFTQ SGSSVRQQQQ
301 LPATSPFVDP LDARAIPVTG SSSSGDGQPS MIHLPALTRN IHQFAWSASS SSRANSMPEE
361 GLSPWDAPRI NSEQPVFTTP ANETRNPVQD QFCWSFTRGN PSTSGDSPFV PRAGSSSGIH
421 GLQPNPTWVT PHNQSRISEV APWSLFPSIE SESATHGASL PLLPTGPSVS SNEAAAPSGS
481 SSRSHRSRQR RSGLLLERQN DHLHLRHLGR SLAADNDGRN RLISEIRQVL SAMRRGENLR
541 FEDYMVFDPL IYQGMAEMHD RHRDMRLDVD NMSYEELLAL GERIGDVSTG LSEEVILKVM
601 KQHKHTSSAA GSHQDMEPCC VCQEEYAEGD DLGTLGCGHE FHTACVKQWL MLKNLCPICK
661 TVALST
//