LOCUS AEE86274.1 664 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana tRNA synthetase class II (D, K and
N) family protein protein.
ACCESSION CP002687-6226
PROTEIN_ID AEE86274.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G33760"
/gene_synonym="T16L1.250"
/gene_synonym="T16L1_250"
/inference="Similar to RNA sequence,
EST:INSD:AU230957.1,INSD:EH905331.1,INSD:ES097348.1,
INSD:DR369524.1,INSD:BP672188.1,INSD:AU239623.1,
INSD:EH854897.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX829222.1,INSD:BX828284.1,INSD:AK118754.1"
/note="tRNA synthetase class II (D, K and N) family
protein; FUNCTIONS IN: in 6 functions; INVOLVED IN:
aspartyl-tRNA aminoacylation, translation, tRNA
aminoacylation for protein translation; LOCATED IN:
mitochondrion, chloroplast, membrane, cytoplasm; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold (InterPro:IPR012340), Nucleic acid binding,
OB-fold, tRNA/helicase-type (InterPro:IPR004365),
Aspartyl/Asparaginyl-tRNA synthetase, class IIb
(InterPro:IPR002312), Aminoacyl-tRNA synthetase, class II,
conserved domain (InterPro:IPR006195), Aspartyl-tRNA
synthetase, class IIb, bacterial/mitochondrial type
(InterPro:IPR004524), Nucleic acid-binding, OB-fold-like
(InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II
(D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase,
class II (D/K/N)-like (InterPro:IPR018150), Aspartyl-tRNA
synthetase, class IIb, bacterial/mitochondrial type,
C-terminal (InterPro:IPR018153), GAD domain
(InterPro:IPR004115); BEST Arabidopsis thaliana protein
match is: Lysyl-tRNA synthetase, class II
(TAIR:AT3G13490.1); Has 31429 Blast hits to 23398 proteins
in 2969 species: Archae - 812; Bacteria - 21040; Metazoa -
874; Fungi - 1027; Plants - 329; Viruses - 0; Other
Eukaryotes - 7347 (source: NCBI BLink)."
/db_xref="TAIR:AT4G33760"
/db_xref="Araport:AT4G33760"
intron_pos 120:0 (1/14)
intron_pos 168:0 (2/14)
intron_pos 204:2 (3/14)
intron_pos 242:0 (4/14)
intron_pos 266:0 (5/14)
intron_pos 296:2 (6/14)
intron_pos 337:0 (7/14)
intron_pos 378:0 (8/14)
intron_pos 443:1 (9/14)
intron_pos 506:0 (10/14)
intron_pos 530:0 (11/14)
intron_pos 563:0 (12/14)
intron_pos 590:0 (13/14)
intron_pos 609:1 (14/14)
BEGIN
1 MSLLLRTLPL RPTRFLSATA ISISNATNFF VVPKRTNPLP GTRRTFSSSP VAAASGDVVV
61 KPVPSPPSVL RWVSRTELCG ELSVNDVGKR VHLCGWVALH RVHGGLTFLN LRDHTGIVQV
121 RTLPDEFPEA HGLINDMRLE YVVLVEGTVR SRPNESVNKK MKTGFVEVVA EHVEILNPVR
181 TKLPFLVTTA DENKDLIKEE IRLRFRCLDL RRQQMKNNIV LRHNVVKLIR RYLEDRHGFI
241 EIETPILSRS TPEGARDYLV PSRIQSGTFY ALPQSPQLFK QMLMVSGFDK YYQIARCFRD
301 EDLRADRQPE FTQLDMEMAF MPMEDMLKLN EDLIRKVFSE IKGIQLPDPF PRLTYADAMD
361 RYGSDRPDTR FDLELKDVSN VFTESSFRVF TEALESGGII KVLCVPLGAK KYSNSALKKG
421 DIYNEAMKSG AKGLPFLKVL DNGEIEGIAA LVSSLDSAGK INFVKQCGAA PGDLILFGVG
481 PVTSVNKTLD RLRLFVAHDM DLIDHSKHSI LWVTDFPMFE WNEPEQRLEA LHHPFTAPKP
541 EDMDDLPSAR ALAYDMVYNG VEIGGGSLRI YKRDVQEKVL EIIGISPEEA ESKFGYLLEA
601 LDMGAPPHGG IAYGLDRMVM MLGGASSIRD VIAFPKTTTA QCALTRTPSE VDPKQLQDLS
661 IRTK
//