LOCUS AEE86265.1 461 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pyridoxal phosphate (PLP)-dependent
transferases superfamily protein protein.
ACCESSION CP002687-6212
PROTEIN_ID AEE86265.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="AGD2"
/locus_tag="AT4G33680"
/gene_synonym="ABERRANT GROWTH AND DEATH 2"
/gene_synonym="T16L1.170"
/gene_synonym="T16L1_170"
/inference="Similar to RNA sequence,
EST:INSD:BP625623.1,INSD:ES006070.1,INSD:EL218397.1,
INSD:EL322718.1,INSD:DR377602.1,INSD:BP595653.1,
INSD:AV828712.1,INSD:BP613725.1,INSD:EH876699.1,
INSD:BP564414.1,INSD:DR213951.1,INSD:BP859470.1,
INSD:BP622613.1,INSD:EH845630.1,INSD:BP856820.1,
INSD:DR342740.1,INSD:BP786133.1,INSD:EH933707.1,
INSD:EH807238.1,INSD:EL009725.1,INSD:AV558814.1,
INSD:AV556940.1,INSD:DR342739.1,INSD:AV560315.1,
INSD:BP585998.1,INSD:DR342737.1,INSD:DR380738.1,
INSD:EL159401.1,INSD:BP783820.1,INSD:DR342736.1,
INSD:EH894138.1,INSD:EL288631.1,INSD:ES166823.1,
INSD:EG457743.1,INSD:BP867046.1,INSD:EL102244.1,
INSD:DR376205.1,INSD:BP582842.1,INSD:AV524925.2,
INSD:EL321545.1,INSD:BP658412.1,INSD:EL311820.1,
INSD:DR342743.1,INSD:EH908258.1,INSD:DR342742.1,
INSD:ES163666.1,INSD:ES057328.1,INSD:ES211057.1,
INSD:EL980777.1,INSD:EL326141.1,INSD:ES204457.1,
INSD:ES000111.1,INSD:DR342734.1,INSD:AV810587.1,
INSD:ES083947.1,INSD:EH863410.1,INSD:EL080250.1,
INSD:BP622825.1,INSD:EH816665.1,INSD:DR342738.1,
INSD:DR342733.1,INSD:EG457744.1,INSD:EH797564.1,
INSD:EL981977.1,INSD:ES100663.1,INSD:DR342741.1,
INSD:EG473288.1,INSD:ES171879.1,INSD:ES174043.1,
INSD:BP576819.1,INSD:CK118686.1,INSD:BP589358.1,
INSD:EH948767.1,INSD:AV803224.1,INSD:EL276050.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY056423.1,INSD:AY518701.1,INSD:AY065256.1,
INSD:AY117246.1"
/note="ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN:
transaminase activity, copper ion binding,
L,L-diaminopimelate aminotransferase activity; INVOLVED
IN: lysine biosynthetic process via diaminopimelate,
systemic acquired resistance, salicylic acid mediated
signaling pathway; LOCATED IN: chloroplast, chloroplast
stroma; EXPRESSED IN: 26 plant structures; EXPRESSED
DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s:
LL-diaminopimelate aminotransferase, plant-related
(InterPro:IPR019942), Pyridoxal phosphate-dependent
transferase, major domain (InterPro:IPR015424),
Aminotransferase, class I/classII (InterPro:IPR004839),
Pyridoxal phosphate-dependent transferase, major region,
subdomain 1 (InterPro:IPR015421), Pyridoxal
phosphate-dependent transferase, major region, subdomain 2
(InterPro:IPR015422); BEST Arabidopsis thaliana protein
match is: AGD2-like defense response protein 1
(TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G33680"
/db_xref="Araport:AT4G33680"
intron_pos 28:2 (1/9)
intron_pos 54:1 (2/9)
intron_pos 77:0 (3/9)
intron_pos 116:0 (4/9)
intron_pos 137:0 (5/9)
intron_pos 172:0 (6/9)
intron_pos 189:0 (7/9)
intron_pos 296:0 (8/9)
intron_pos 365:0 (9/9)
BEGIN
1 MSSTHQLVSS MISSSSSTFL APSNFNLRTR NACLPMAKRV NTCKCVATPQ EKIEYKTKVS
61 RNSNMSKLQA GYLFPEIARR RSAHLLKYPD AQVISLGIGD TTEPIPEVIT SAMAKKAHEL
121 STIEGYSGYG AEQGAKPLRA AIAKTFYGGL GIGDDDVFVS DGAKCDISRL QVMFGSNVTI
181 AVQDPSYPAY VDSSVIMGQT GQFNTDVQKY GNIEYMRCTP ENGFFPDLST VGRTDIIFFC
241 SPNNPTGAAA TREQLTQLVE FAKKNGSIIV YDSAYAMYMS DDNPRSIFEI PGAEEVAMET
301 ASFSKYAGFT GVRLGWTVIP KKLLYSDGFP VAKDFNRIIC TCFNGASNIS QAGALACLTP
361 EGLEAMHKVI GFYKENTNII IDTFTSLGYD VYGGKNAPYV WVHFPNQSSW DVFAEILEKT
421 HVVTTPGSGF GPGGEGFVRV SAFGHRENIL EACRRFKQLY K
//