LOCUS AEE86169.1 607 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Thiamine pyrophosphate dependent
pyruvate decarboxylase family protein protein.
ACCESSION CP002687-6091
PROTEIN_ID AEE86169.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G33070"
/gene_synonym="AtPDC1"
/gene_synonym="F4I10.4"
/gene_synonym="PDC1"
/gene_synonym="pyruvate decarboxylase 1"
/inference="Similar to RNA sequence,
EST:INSD:BP592730.1,INSD:AV548716.1,INSD:EG425452.1,
INSD:EH834967.1,INSD:Z34945.1,INSD:AV538162.1,
INSD:EG485024.1,INSD:BP576982.1,INSD:AV828041.1,
INSD:BP575282.1,INSD:BP570688.1,INSD:EG513089.1,
INSD:EG519532.1,INSD:BP785260.1,INSD:AA597828.1,
INSD:BP575176.1,INSD:BP575255.1,INSD:BP803077.1,
INSD:BP791921.1,INSD:Z35007.1,INSD:AV561370.1,
INSD:EG519531.1,INSD:N97215.1,INSD:R90074.1,
INSD:AV818130.1,INSD:AI993820.1,INSD:AV565793.1,
INSD:EG485039.1,INSD:AV818499.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY122926.1,INSD:AY070036.1,INSD:BX827143.1,
INSD:BX827533.1"
/note="Thiamine pyrophosphate dependent pyruvate
decarboxylase family protein; FUNCTIONS IN: in 6
functions; LOCATED IN: membrane; EXPRESSED IN: 11 plant
structures; EXPRESSED DURING: 4 anthesis, C globular
stage, F mature embryo stage, petal differentiation and
expansion stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: TPP-binding enzyme, conserved site
(InterPro:IPR000399), Thiamine pyrophosphate enzyme,
central domain (InterPro:IPR012000), Pyruvate
decarboxylase/indolepyruvate decarboxylase
(InterPro:IPR012110), Thiamine pyrophosphate enzyme,
N-terminal TPP-binding domain (InterPro:IPR012001),
Thiamine pyrophosphate enzyme, C-terminal TPP-binding
(InterPro:IPR011766); BEST Arabidopsis thaliana protein
match is: Thiamine pyrophosphate dependent pyruvate
decarboxylase family protein (TAIR:AT5G01320.1); Has 20589
Blast hits to 20526 proteins in 2548 species: Archae -
428; Bacteria - 13367; Metazoa - 177; Fungi - 761; Plants
- 551; Viruses - 4; Other Eukaryotes - 5301 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G33070"
/db_xref="Araport:AT4G33070"
intron_pos 178:0 (1/4)
intron_pos 232:2 (2/4)
intron_pos 449:2 (3/4)
intron_pos 552:0 (4/4)
BEGIN
1 MDTKIGSIDD CKPTNGDVCS PTNGTVATIH NSVPSSAITI NYCDATLGRH LARRLVQAGV
61 TDVFSVPGDF NLTLLDHLMA EPDLNLIGCC NELNAGYAAD GYARSRGVGA CVVTFTVGGL
121 SVLNAIAGAY SENLPLICIV GGPNSNDYGT NRILHHTIGL PDFSQELRCF QTVTCYQAVV
181 NNLDDAHEQI DKAISTALKE SKPVYISVSC NLAAIPHHTF SRDPVPFSLA PRLSNKMGLE
241 AAVEATLEFL NKAVKPVMVG GPKLRVAKAC DAFVELADAS GYALAMMPSA KGFVPEHHPH
301 FIGTYWGAVS TPFCSEIVES ADAYIFAGPI FNDYSSVGYS LLLKKEKAIV VQPDRITVAN
361 GPTFGCILMS DFFRELSKRV KRNETAYENY HRIFVPEGKP LKCESREPLR VNTMFQHIQK
421 MLSSETAVIA ETGDSWFNCQ KLKLPKGCGY EFQMQYGSIG WSVGATLGYA QASPEKRVLA
481 FIGDGSFQVT VQDISTMLRN GQKTIIFLIN NGGYTIEVEI HDGPYNVIKN WNYTGLVDAI
541 HNGEGNCWTA KVRYEEELVE AITTATTEKK DCLCFIEVIL HKDDTSKELL EWGSRVSAAN
601 SRPPNPQ
//