LOCUS AEE86142.1 716 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nuclear pore complex Nup85-like protein
protein.
ACCESSION CP002687-6056
PROTEIN_ID AEE86142.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G32910"
/inference="Similar to RNA sequence,
EST:INSD:AV812829.1,INSD:EH962801.1,INSD:EG481506.1,
INSD:BP619716.1,INSD:EL017637.1,INSD:BX837343.1,
INSD:EH828653.1,INSD:EH912801.1,INSD:AV830732.1,
INSD:BP597875.1,INSD:ES201431.1,INSD:DR355249.1,
INSD:EL272876.1,INSD:BP853570.1,INSD:BX834366.1,
INSD:EH873522.1,INSD:EL086082.1,INSD:EL166675.1,
INSD:AV811527.1,INSD:EG427368.1,INSD:AV792011.1,
INSD:AV827128.1,INSD:EL038380.1,INSD:EH870854.1,
INSD:EL040998.1,INSD:BP627386.1,INSD:AV783730.1,
INSD:EL321298.1,INSD:AV797311.1,INSD:EG427367.1,
INSD:AV822866.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF361625.1,INSD:AY081256.1,INSD:BT002244.1"
/note="CONTAINS InterPro DOMAIN/s: Nuclear pore complex
protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has
30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="TAIR:AT4G32910"
/db_xref="Araport:AT4G32910"
intron_pos 126:2 (1/17)
intron_pos 161:0 (2/17)
intron_pos 198:0 (3/17)
intron_pos 226:0 (4/17)
intron_pos 250:0 (5/17)
intron_pos 269:0 (6/17)
intron_pos 309:0 (7/17)
intron_pos 376:0 (8/17)
intron_pos 413:0 (9/17)
intron_pos 425:2 (10/17)
intron_pos 478:0 (11/17)
intron_pos 512:0 (12/17)
intron_pos 531:0 (13/17)
intron_pos 580:0 (14/17)
intron_pos 603:2 (15/17)
intron_pos 633:0 (16/17)
intron_pos 652:0 (17/17)
BEGIN
1 MPGMSSESGG GELVLFSTKE KTPVLYPLSY GLKSPVHRLS ISWGCGNNLR VTVLRNPELR
61 DDDDGEVGGK VVNVRLSGED GEISDPQWRR IAYGSVSPFA LLQSRRNSIS SLSKMDMSSS
121 LYQTAWWEYV MEYSRDIKSL LSNTISLPAP LIEDPRSVIK NAEEPTSLKA AWELMELFYA
181 DKTCLSWLPE RLVDWLSEYD ILLSSSHPTI YSKLQDFQKE LVGLQAIEDD PRYWEVMASA
241 LSVGWLEIVV KLLHLHGSYQ LDQLGHRETE NGLVEAVAVL ISKMPRMRPQ LEDGKFGECS
301 AAKPDFMKTR ERWQSQITKL ECSAFWVQCA HHQTREGLRN MLKIMIGNAD CLRAATCNWM
361 ELFVSHLLYL RPFTKGLDGM HSLAQKCVQS KPVNTSHKLL RLLIGILGEN TEVVLAECSK
421 EFGSWMVAHA MELLTAGSEE GEVLVHEEQR KLGGINMEEL HRLVYAQVLS SHALTWQIAP
481 IYLASCEKQG LGLLELLFYR QPVQENQMLI KSLEICRLYE LSNVSAKLMK ISGVHHWKHG
541 RKGSGIFWLQ QARDENCLSV IAQQLFDSVG KSLSDESLKQ WEGLVELLGS ESQISGGLDF
601 LHKYRDFKRS LKVVHDGKTI DAAHEAVERL VSLMKSPSTP QRFWLPLLHD SLKLLNWPER
661 SLLNVTQTNL MLNKLQELSI ARLRPGFIES ELSAQAVGSV RLALATNLGR AFLEEC
//